RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TDRD7Q8NHU6 1098 aaKnown RBP7.42□□□□□ -1.22
VPS33B-207ENST00000557470 FOXD4L4Q8WXT5 416 aaPredicted RBP7.42□□□□□ -1.22
VPS33B-207ENST00000557470 CLUAP1Q96AJ1 413 aa7.42□□□□□ -1.22
VPS33B-207ENST00000557470 FAM117AQ9C073 453 aa7.42□□□□□ -1.22
VPS33B-207ENST00000557470 PRKRIP1Q9H875 184 aaPredicted RBP7.42□□□□□ -1.22
VPS33B-207ENST00000557470 CSADQ9Y600 493 aa7.42□□□□□ -1.22
VPS33B-207ENST00000557470 SNCAIPQ9Y6H5 919 aa7.42□□□□□ -1.22
VPS33B-207ENST00000557470 SPDYE5A6NIY4 337 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 BTBD19C9JJ37 291 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 E9PSI1 815 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 F6X3S4 739 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 IRF6O14896 467 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 RNF40O75150 1001 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 CETPP11597 493 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 CTGFP29279 349 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 CRKP46108 304 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 CACNB3P54284 484 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 KIF22Q14807 665 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 MTFR1Q15390 333 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 TAF7LQ5H9L4 462 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 BEND3Q5T5X7 828 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 LDHAL6AQ6ZMR3 332 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 GPIHBP1Q8IV16 184 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 CNNM1Q9NRU3 951 aa7.41□□□□□ -1.22
VPS33B-207ENST00000557470 WDHD1O75717 1129 aaPredicted RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 GNRH1P01148 92 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 HIBADHP31937 336 aaKnown RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 TNNI2P48788 182 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 SNAPC2Q13487 334 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 UBE4AQ14139 1066 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 CCDC27Q2M243 656 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 CCDC57Q2TAC2 916 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 ERO1BQ86YB8 467 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 WWC1Q8IX03 1113 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 DPF3Q92784 378 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 ZKSCAN4Q969J2 545 aaPredicted RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 FAM84BQ96KN1 310 aaPredicted RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 WRNIP1Q96S55 665 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 PUS3Q9BZE2 481 aaKnown RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 ZCCHC17Q9NP64 241 aaKnown RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 IQSEC3Q9UPP2 1182 aaPredicted RBP7.4□□□□□ -1.22
VPS33B-207ENST00000557470 FANCIQ9NVI1 1328 aa7.4□□□□□ -1.22
VPS33B-207ENST00000557470 COL6A3P12111 3177 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 CUL9Q8IWT3 2517 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 ADGRA2Q96PE1 1338 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 GRM8O00222 908 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 PSMC4P43686 418 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 PRMT2P55345 433 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 KCNC4Q03721 635 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 CHAF1AQ13111 956 aaPredicted RBP7.39□□□□□ -1.23
VPS33B-207ENST00000557470 PPIL2Q13356 520 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 C17orf99Q6UX52 265 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 UBE2Q1Q7Z7E8 422 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.39□□□□□ -1.23
VPS33B-207ENST00000557470 DDRGK1Q96HY6 314 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 TRIM47Q96LD4 638 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 PRO3102Q9H379 93 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 SRRDQ9UH36 339 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 CPA4Q9UI42 421 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 LAMA3Q16787 3333 aa7.39□□□□□ -1.23
VPS33B-207ENST00000557470 IL16Q14005 1332 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 PDHXO00330 501 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 VAMP4O75379 141 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 CCL5P13501 91 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 INPP5BP32019 993 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 GRK4P32298 578 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 GJA8P48165 433 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 HDLBPQ00341 1268 aaKnown RBP7.38□□□□□ -1.23
VPS33B-207ENST00000557470 APOBEC3HQ6NTF7 200 aaKnown RBP7.38□□□□□ -1.23
VPS33B-207ENST00000557470 FBXO33Q7Z6M2 555 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 VPS37DQ86XT2 251 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 NKX2-3Q8TAU0 364 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 RAET1EQ8TD07 263 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 TEKT1Q969V4 418 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 ZDHHC15Q96MV8 337 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 TMOD2Q9NZR1 351 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 RIPOR2Q9Y4F9 1068 aa7.38□□□□□ -1.23
VPS33B-207ENST00000557470 RPAP1Q9BWH6 1393 aaPredicted RBP7.37□□□□□ -1.23
VPS33B-207ENST00000557470 MROH5Q6ZUA9 1318 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 MYPNQ86TC9 1320 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 FMNL1O95466 1100 aaPredicted RBP7.37□□□□□ -1.23
VPS33B-207ENST00000557470 GJB1P08034 283 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 PRKCZQ05513 592 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 PPATQ06203 517 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 MOGSQ13724 837 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 CCDC184Q52MB2 194 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 TJAP1Q5JTD0 557 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 FKBP1CQ5VVH2 108 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 DCAF15Q66K64 600 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 MIGA2Q7L4E1 593 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 ANKRD23Q86SG2 305 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 FAM83AQ86UY5 434 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 TBC1D22AQ8WUA7 517 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 KAZALD1Q96I82 304 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 SUCLG2Q96I99 432 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 HTATIP2Q9BUP3 242 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 RNF208Q9H0X6 261 aa7.37□□□□□ -1.23
VPS33B-207ENST00000557470 C9orf78Q9NZ63 289 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms