RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 PI4KBQ9UBF8 816 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 LAMA4Q16363 1823 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 PHIPQ8WWQ0 1821 aa17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 TBC1D12O60347 775 aa17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 INPP5BP32019 993 aa17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 VPS53Q5VIR6 699 aa17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 CYP4F22Q6NT55 531 aa17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 ANKRD13AQ8IZ07 590 aa17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 DDRGK1Q96HY6 314 aa17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 ZNF112Q9UJU3 913 aa17.8■□□□□ 0.44
VIPAS39-210ENST00000557466 CYP2D7A0A087X1C5 515 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 PHF20L1A8MW92 1017 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 CHMLP26374 656 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 PLCD1P51178 756 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 MAP3K9P80192 1104 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 VGLL4Q14135 290 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 TTC6Q86TZ1 520 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 METTL16Q86W50 562 aaKnown RBP17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 RASAL3Q86YV0 1011 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 CRACR2BQ8N4Y2 399 aaPredicted RBP17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 CAPNS2Q96L46 248 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 EHD4Q9H223 541 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 IL25Q9H293 177 aa17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 HERC5Q9UII4 1024 aaKnown RBP17.79■□□□□ 0.44
VIPAS39-210ENST00000557466 FAM155AB1AL88 458 aaPredicted RBP17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 PATL2C9JE40 543 aaKnown RBP17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 USP17L12C9JPN9 530 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 USP17L21D6R901 530 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 SMIM22K7EJ46 135 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 APPP05067 770 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 SLC10A3P09131 477 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 VEGFBP49765 207 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 ZNF157P51786 506 aaPredicted RBP17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 GRM1Q13255 1194 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 GIMAP6Q6P9H5 292 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 CTR9Q6PD62 1173 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 FOXP4Q8IVH2 680 aaPredicted RBP17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 IFNL3Q8IZI9 196 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 DNAJC5GQ8N7S2 189 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 ZKSCAN4Q969J2 545 aaPredicted RBP17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 SNCAIPQ9Y6H5 919 aa17.78■□□□□ 0.44
VIPAS39-210ENST00000557466 RAD50Q92878 1312 aa17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 UNCXA6NJT0 531 aa17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 TDO2P48775 406 aa17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 RRP1BQ14684 758 aaKnown RBP17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 C12orf60Q5U649 245 aa17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 TRIM34Q9BYJ4 488 aa17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 ELP3Q9H9T3 547 aa17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 SERPINB13Q9UIV8 391 aa17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 CSADQ9Y600 493 aa17.77■□□□□ 0.44
VIPAS39-210ENST00000557466 WDR33Q9C0J8 1336 aaKnown RBP17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 ECE1P42892 770 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 GABPAQ06546 454 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 SBK1Q52WX2 424 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 NOL9Q5SY16 702 aaKnown RBP17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 AMOTL1Q8IY63 956 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 DYNLL2Q96FJ2 89 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 NACAP1Q9BZK3 213 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 NAPBQ9H115 298 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 PTPRFP10586 1907 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 ROBO3Q96MS0 1386 aa17.76■□□□□ 0.43
VIPAS39-210ENST00000557466 HSPD1P10809 573 aaKnown RBP17.75■□□□□ 0.43
VIPAS39-210ENST00000557466 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
VIPAS39-210ENST00000557466 SCYL3Q8IZE3 742 aa17.75■□□□□ 0.43
VIPAS39-210ENST00000557466 SLC44A5Q8NCS7 719 aa17.75■□□□□ 0.43
VIPAS39-210ENST00000557466 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
VIPAS39-210ENST00000557466 CCDC102AQ96A19 550 aa17.75■□□□□ 0.43
VIPAS39-210ENST00000557466 SLC10A4Q96EP9 437 aa17.75■□□□□ 0.43
VIPAS39-210ENST00000557466 WNK4Q96J92 1243 aa17.75■□□□□ 0.43
VIPAS39-210ENST00000557466 SPDYE5A6NIY4 337 aa17.74■□□□□ 0.43
VIPAS39-210ENST00000557466 AOC2O75106 756 aa17.74■□□□□ 0.43
VIPAS39-210ENST00000557466 SHMT1P34896 483 aa17.74■□□□□ 0.43
VIPAS39-210ENST00000557466 GJA5P36382 358 aa17.74■□□□□ 0.43
VIPAS39-210ENST00000557466 SHROOM1Q2M3G4 852 aaPredicted RBP17.74■□□□□ 0.43
VIPAS39-210ENST00000557466 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
VIPAS39-210ENST00000557466 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.74■□□□□ 0.43
VIPAS39-210ENST00000557466 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
VIPAS39-210ENST00000557466 ZMYM6O95789 1325 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 MINDY4BA8MYZ0 360 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 SGSM2O43147 1006 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 CTNND1O60716 968 aaKnown RBP17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 CAP2P40123 477 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 JAG1P78504 1218 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 MKRN3Q13064 507 aaKnown RBP17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 ALX1Q15699 326 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 SPRYD7Q5W111 196 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 TATDN1Q6P1N9 297 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 C16orf86Q6ZW13 317 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 OPTNQ96CV9 577 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 ZIC5Q96T25 663 aa17.73■□□□□ 0.43
VIPAS39-210ENST00000557466 CDC45O75419 566 aa17.72■□□□□ 0.43
VIPAS39-210ENST00000557466 GDF11O95390 407 aa17.72■□□□□ 0.43
VIPAS39-210ENST00000557466 NOGQ13253 232 aa17.72■□□□□ 0.43
VIPAS39-210ENST00000557466 CCDC84Q86UT8 332 aaPredicted RBP17.72■□□□□ 0.43
VIPAS39-210ENST00000557466 ERO1BQ86YB8 467 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms