RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 LRRC26Q2I0M4 334 aa10.07□□□□□ -0.8
PCNX1-215ENST00000557428 ANKRD44Q8N8A2 993 aa10.07□□□□□ -0.8
PCNX1-215ENST00000557428 TRIB2Q92519 343 aa10.07□□□□□ -0.8
PCNX1-215ENST00000557428 LBHD1Q9BQE6 289 aaPredicted RBP10.07□□□□□ -0.8
PCNX1-215ENST00000557428 CWC22Q9HCG8 908 aaKnown RBP10.07□□□□□ -0.8
PCNX1-215ENST00000557428 GNL3LQ9NVN8 582 aaKnown RBP10.07□□□□□ -0.8
PCNX1-215ENST00000557428 KIF16BQ96L93 1317 aa10.07□□□□□ -0.8
PCNX1-215ENST00000557428 DDTLA6NHG4 134 aaPredicted RBP10.06□□□□□ -0.8
PCNX1-215ENST00000557428 CTNND1O60716 968 aaKnown RBP10.06□□□□□ -0.8
PCNX1-215ENST00000557428 ENTPD3O75355 529 aa10.06□□□□□ -0.8
PCNX1-215ENST00000557428 ZKSCAN1P17029 563 aaPredicted RBP10.06□□□□□ -0.8
PCNX1-215ENST00000557428 FGFR2P21802 821 aa10.06□□□□□ -0.8
PCNX1-215ENST00000557428 GCLCP48506 637 aaPredicted RBP10.06□□□□□ -0.8
PCNX1-215ENST00000557428 PABPC4Q13310 644 aaKnown RBP eCLIP10.06□□□□□ -0.8
PCNX1-215ENST00000557428 SH3BP5LQ7L8J4 393 aa10.06□□□□□ -0.8
PCNX1-215ENST00000557428 CCAR1Q8IX12 1150 aaKnown RBP10.06□□□□□ -0.8
PCNX1-215ENST00000557428 LPIN2Q92539 896 aa10.06□□□□□ -0.8
PCNX1-215ENST00000557428 SIL1Q9H173 461 aa10.06□□□□□ -0.8
PCNX1-215ENST00000557428 OGDHLQ9ULD0 1010 aa10.06□□□□□ -0.8
PCNX1-215ENST00000557428 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-215ENST00000557428 BTDP43251 543 aa10.05□□□□□ -0.8
PCNX1-215ENST00000557428 IRX3P78415 501 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-215ENST00000557428 SPP2Q13103 211 aa10.05□□□□□ -0.8
PCNX1-215ENST00000557428 PDE3AQ14432 1141 aa10.05□□□□□ -0.8
PCNX1-215ENST00000557428 ATP2B3Q16720 1220 aa10.05□□□□□ -0.8
PCNX1-215ENST00000557428 RABL6Q3YEC7 729 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-215ENST00000557428 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-215ENST00000557428 MAFAQ8NHW3 353 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-215ENST00000557428 ASCC2Q9H1I8 757 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-215ENST00000557428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.05□□□□□ -0.8
PCNX1-215ENST00000557428 DDX4Q9NQI0 724 aaKnown RBP10.05□□□□□ -0.8
PCNX1-215ENST00000557428 ABCF2Q9UG63 623 aa10.05□□□□□ -0.8
PCNX1-215ENST00000557428 EYA2O00167 538 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 PEX10O60683 326 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 CCND3P30281 292 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-215ENST00000557428 PHKA1P46020 1223 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-215ENST00000557428 ATN1P54259 1190 aaPredicted RBP10.04□□□□□ -0.8
PCNX1-215ENST00000557428 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 ZNF280CQ8ND82 737 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 NUDT12Q9BQG2 462 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 IDI2Q9BXS1 227 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 PRDM6Q9NQX0 595 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 PRKAG2Q9UGJ0 569 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 GJD2Q9UKL4 321 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 DENND2AQ9ULE3 1009 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 LTBP2Q14767 1821 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 PRUNE2Q8WUY3 3088 aa10.04□□□□□ -0.8
PCNX1-215ENST00000557428 VCANP13611 3396 aa10.03□□□□□ -0.8
PCNX1-215ENST00000557428 RFX7Q2KHR2 1363 aa10.03□□□□□ -0.8
PCNX1-215ENST00000557428 CACNB2Q08289 660 aaPredicted RBP10.03□□□□□ -0.8
PCNX1-215ENST00000557428 SLF2Q8IX21 1173 aa10.03□□□□□ -0.8
PCNX1-215ENST00000557428 ZGPATQ8N5A5 531 aaKnown RBP10.03□□□□□ -0.8
PCNX1-215ENST00000557428 SOCS4Q8WXH5 440 aa10.03□□□□□ -0.8
PCNX1-215ENST00000557428 MYLIPQ8WY64 445 aa10.03□□□□□ -0.8
PCNX1-215ENST00000557428 CDX2Q99626 313 aaPredicted RBP10.03□□□□□ -0.8
PCNX1-215ENST00000557428 PAGR1Q9BTK6 254 aa10.03□□□□□ -0.8
PCNX1-215ENST00000557428 SENP6Q9GZR1 1112 aaPredicted RBP10.03□□□□□ -0.8
PCNX1-215ENST00000557428 TMOD4Q9NZQ9 345 aa10.03□□□□□ -0.8
PCNX1-215ENST00000557428 UTYO14607 1347 aa10.03□□□□□ -0.8
PCNX1-215ENST00000557428 POTEB2H3BUK9 544 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 CNGA1P29973 690 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 MTMR2Q13614 643 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 CCL14Q16627 93 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 WDR78Q5VTH9 848 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 FAM109BQ6ICB4 259 aaPredicted RBP10.02□□□□□ -0.81
PCNX1-215ENST00000557428 OSBPL5Q9H0X9 879 aaPredicted RBP10.02□□□□□ -0.81
PCNX1-215ENST00000557428 AS3MTQ9HBK9 375 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 PRDM5Q9NQX1 630 aaPredicted RBP10.02□□□□□ -0.81
PCNX1-215ENST00000557428 CEP126Q9P2H0 1117 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 ATP11BQ9Y2G3 1177 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 COL2A1P02458 1487 aaPredicted RBP10.02□□□□□ -0.81
PCNX1-215ENST00000557428 MROH7-TTC4A0A0A0MT08 1334 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 GAKO14976 1311 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 SALL1Q9NSC2 1324 aa10.02□□□□□ -0.81
PCNX1-215ENST00000557428 USP17L5A8MUK1 530 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 COL6A1P12109 1028 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 FOSL2P15408 326 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 ADORA1P30542 326 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 RGS2P41220 211 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 MAP3K21Q5TCX8 1036 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
PCNX1-215ENST00000557428 GPRC5AQ8NFJ5 357 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 MORF4L1Q9UBU8 362 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 NDUFB9Q9Y6M9 179 aa10.01□□□□□ -0.81
PCNX1-215ENST00000557428 SPTBN5Q9NRC6 3674 aaKnown RBP10.01□□□□□ -0.81
PCNX1-215ENST00000557428 SEMA3EO15041 775 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 COL9A1P20849 921 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 MAPK4P31152 587 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 RTP1P59025 263 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 HERVK_113P62684 666 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 SPTY2D1Q68D10 685 aaPredicted RBP10□□□□□ -0.81
PCNX1-215ENST00000557428 ERICH6Q7L0X2 663 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 ATG9AQ7Z3C6 839 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 P2RX7Q99572 595 aaKnown RBP10□□□□□ -0.81
PCNX1-215ENST00000557428 APBA2Q99767 749 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 TRIM34Q9BYJ4 488 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 TBC1D2Q9BYX2 928 aa10□□□□□ -0.81
PCNX1-215ENST00000557428 TXNRD2Q9NNW7 524 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms