RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
RTN1-208ENST00000557422 FAM196BA6NMK8 535 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 ADORA1P30542 326 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 BTDP43251 543 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 HMGCS2P54868 508 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 PABPC4Q13310 644 aaKnown RBP eCLIP15.16■□□□□ 0.02
RTN1-208ENST00000557422 CCDC102BQ68D86 513 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 SLF2Q8IX21 1173 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 TRIB2Q92519 343 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 COL25A1Q9BXS0 654 aaPredicted RBP15.16■□□□□ 0.02
RTN1-208ENST00000557422 OSBPL5Q9H0X9 879 aaPredicted RBP15.16■□□□□ 0.02
RTN1-208ENST00000557422 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.16■□□□□ 0.02
RTN1-208ENST00000557422 ABCF2Q9UG63 623 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 PFASO15067 1338 aa15.16■□□□□ 0.02
RTN1-208ENST00000557422 PLXNB2O15031 1838 aa15.15■□□□□ 0.02
RTN1-208ENST00000557422 RHBDL3P58872 404 aa15.15■□□□□ 0.02
RTN1-208ENST00000557422 MAP3K21Q5TCX8 1036 aa15.15■□□□□ 0.02
RTN1-208ENST00000557422 MORF4L1Q9UBU8 362 aa15.15■□□□□ 0.02
RTN1-208ENST00000557422 LOC285556D6RIA3 1793 aa15.15■□□□□ 0.02
RTN1-208ENST00000557422 MROH7-TTC4A0A0A0MT08 1334 aa15.15■□□□□ 0.02
RTN1-208ENST00000557422 UNC80Q8N2C7 3258 aa15.14■□□□□ 0.01
RTN1-208ENST00000557422 GPR75-ASB3A0A0A6YYF3 556 aa15.14■□□□□ 0.01
RTN1-208ENST00000557422 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
RTN1-208ENST00000557422 COL6A1P12109 1028 aa15.14■□□□□ 0.01
RTN1-208ENST00000557422 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
RTN1-208ENST00000557422 CYP2B6P20813 491 aa15.14■□□□□ 0.01
RTN1-208ENST00000557422 RASGRF1Q13972 1273 aa15.14■□□□□ 0.01
RTN1-208ENST00000557422 SH3D19Q5HYK7 790 aa15.14■□□□□ 0.01
RTN1-208ENST00000557422 SPTY2D1Q68D10 685 aaPredicted RBP15.14■□□□□ 0.01
RTN1-208ENST00000557422 TBC1D2Q9BYX2 928 aa15.14■□□□□ 0.01
RTN1-208ENST00000557422 CAP2P40123 477 aa15.13■□□□□ 0.01
RTN1-208ENST00000557422 IL15P40933 162 aaPredicted RBP15.13■□□□□ 0.01
RTN1-208ENST00000557422 MECOMQ03112 1051 aa15.13■□□□□ 0.01
RTN1-208ENST00000557422 RRP1BQ14684 758 aaKnown RBP15.13■□□□□ 0.01
RTN1-208ENST00000557422 ZNF384Q8TF68 577 aa15.13■□□□□ 0.01
RTN1-208ENST00000557422 SSH1Q8WYL5 1049 aa15.13■□□□□ 0.01
RTN1-208ENST00000557422 PDS5AQ29RF7 1337 aaKnown RBP15.13■□□□□ 0.01
RTN1-208ENST00000557422 USP17L5A8MUK1 530 aa15.12■□□□□ 0.01
RTN1-208ENST00000557422 PEX10O60683 326 aa15.12■□□□□ 0.01
RTN1-208ENST00000557422 XRCC5P13010 732 aaKnown RBP15.12■□□□□ 0.01
RTN1-208ENST00000557422 TIMM10P62072 90 aa15.12■□□□□ 0.01
RTN1-208ENST00000557422 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.12■□□□□ 0.01
RTN1-208ENST00000557422 NUDT12Q9BQG2 462 aa15.12■□□□□ 0.01
RTN1-208ENST00000557422 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
RTN1-208ENST00000557422 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
RTN1-208ENST00000557422 UBTFL1P0CB47 393 aaPredicted RBP15.11■□□□□ 0.01
RTN1-208ENST00000557422 MDM2Q00987 491 aaPredicted RBP15.11■□□□□ 0.01
RTN1-208ENST00000557422 CACNB2Q08289 660 aaPredicted RBP15.11■□□□□ 0.01
RTN1-208ENST00000557422 LRRC26Q2I0M4 334 aa15.11■□□□□ 0.01
RTN1-208ENST00000557422 LHX8Q68G74 356 aa15.11■□□□□ 0.01
RTN1-208ENST00000557422 FAM109BQ6ICB4 259 aaPredicted RBP15.11■□□□□ 0.01
RTN1-208ENST00000557422 GUCD1Q96NT3 240 aa15.11■□□□□ 0.01
RTN1-208ENST00000557422 P2RX7Q99572 595 aaKnown RBP15.11■□□□□ 0.01
RTN1-208ENST00000557422 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 COL2A1P02458 1487 aaPredicted RBP15.1■□□□□ 0.01
RTN1-208ENST00000557422 MAP4K4O95819 1239 aaPredicted RBP15.1■□□□□ 0.01
RTN1-208ENST00000557422 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
RTN1-208ENST00000557422 IRX3P78415 501 aaPredicted RBP15.1■□□□□ 0.01
RTN1-208ENST00000557422 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 TRMT44Q8IYL2 757 aaKnown RBP15.1■□□□□ 0.01
RTN1-208ENST00000557422 GPRC5AQ8NFJ5 357 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 SOCS4Q8WXH5 440 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 USP6NLQ92738 828 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 WDR18Q9BV38 432 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 AS3MTQ9HBK9 375 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 TXNRD2Q9NNW7 524 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 ZNF521Q96K83 1311 aa15.1■□□□□ 0.01
RTN1-208ENST00000557422 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
RTN1-208ENST00000557422 CCND3P30281 292 aaPredicted RBP15.09■□□□□ 0.01
RTN1-208ENST00000557422 BACE1P56817 501 aa15.09■□□□□ 0.01
RTN1-208ENST00000557422 HERVK_113P62684 666 aa15.09■□□□□ 0.01
RTN1-208ENST00000557422 MTMR2Q13614 643 aa15.09■□□□□ 0.01
RTN1-208ENST00000557422 COPRSQ9NQ92 184 aa15.09■□□□□ 0.01
RTN1-208ENST00000557422 RBPJLQ9UBG7 517 aa15.09■□□□□ 0.01
RTN1-208ENST00000557422 LDHCP07864 332 aa15.08■□□□□ 0
RTN1-208ENST00000557422 MAPK4P31152 587 aa15.08■□□□□ 0
RTN1-208ENST00000557422 GSTO1P78417 241 aa15.08■□□□□ 0
RTN1-208ENST00000557422 JAG1P78504 1218 aa15.08■□□□□ 0
RTN1-208ENST00000557422 CCL14Q16627 93 aa15.08■□□□□ 0
RTN1-208ENST00000557422 NSUN4Q96CB9 384 aaKnown RBP15.08■□□□□ 0
RTN1-208ENST00000557422 XAGE2Q96GT9 111 aa15.08■□□□□ 0
RTN1-208ENST00000557422 TMOD4Q9NZQ9 345 aa15.08■□□□□ 0
RTN1-208ENST00000557422 HERC5Q9UII4 1024 aaKnown RBP15.08■□□□□ 0
RTN1-208ENST00000557422 A0A1B0GUL7 405 aa15.07■□□□□ 0
RTN1-208ENST00000557422 PDE3AQ14432 1141 aa15.07■□□□□ 0
RTN1-208ENST00000557422 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
RTN1-208ENST00000557422 Q3C1V9 767 aa15.07■□□□□ 0
RTN1-208ENST00000557422 MORN1Q5T089 497 aa15.07■□□□□ 0
RTN1-208ENST00000557422 TBC1D9Q6ZT07 1266 aa15.07■□□□□ 0
RTN1-208ENST00000557422 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
RTN1-208ENST00000557422 FAM161BQ96MY7 647 aa15.07■□□□□ 0
RTN1-208ENST00000557422 PORCNQ9H237 461 aa15.07■□□□□ 0
RTN1-208ENST00000557422 HMG20BQ9P0W2 317 aa15.07■□□□□ 0
RTN1-208ENST00000557422 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
RTN1-208ENST00000557422 C19orf81C9J6K1 198 aa15.06■□□□□ 0
RTN1-208ENST00000557422 ASNSP08243 561 aa15.06■□□□□ 0
RTN1-208ENST00000557422 RGS2P41220 211 aa15.06■□□□□ 0
RTN1-208ENST00000557422 ERVK-9P63128 1117 aa15.06■□□□□ 0
RTN1-208ENST00000557422 ERVK-24P63145 666 aa15.06■□□□□ 0
RTN1-208ENST00000557422 TFCP2Q12800 502 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms