RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MKI67P46013 3256 aaKnown RBP10.92□□□□□ -0.66
VRK1-206ENST00000557222 CENPFP49454 3210 aa10.92□□□□□ -0.66
VRK1-206ENST00000557222 A0A1B0GUL6 1792 aa10.91□□□□□ -0.66
VRK1-206ENST00000557222 ANP32CO43423 234 aa10.91□□□□□ -0.66
VRK1-206ENST00000557222 PLIN1O60240 522 aa10.91□□□□□ -0.66
VRK1-206ENST00000557222 FMNL1O95466 1100 aaPredicted RBP10.91□□□□□ -0.66
VRK1-206ENST00000557222 FBXO33Q7Z6M2 555 aa10.91□□□□□ -0.66
VRK1-206ENST00000557222 DZIP1LQ8IYY4 767 aaKnown RBP10.91□□□□□ -0.66
VRK1-206ENST00000557222 EMID1Q96A84 441 aaPredicted RBP10.91□□□□□ -0.66
VRK1-206ENST00000557222 ZNF594Q96JF6 807 aaPredicted RBP10.91□□□□□ -0.66
VRK1-206ENST00000557222 TTF2Q9UNY4 1162 aaKnown RBP10.91□□□□□ -0.66
VRK1-206ENST00000557222 FZD1Q9UP38 647 aa10.91□□□□□ -0.66
VRK1-206ENST00000557222 PTPN22Q9Y2R2 807 aa10.91□□□□□ -0.66
VRK1-206ENST00000557222 SUGT1Q9Y2Z0 365 aa10.91□□□□□ -0.66
VRK1-206ENST00000557222 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
VRK1-206ENST00000557222 TRIM17Q9Y577 477 aa10.91□□□□□ -0.66
VRK1-206ENST00000557222 GJA5P36382 358 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 GTF2A2P52657 109 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 SP3Q02447 781 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 CRHR2Q13324 411 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 RABL6Q3YEC7 729 aaPredicted RBP10.9□□□□□ -0.66
VRK1-206ENST00000557222 FKBP1CQ5VVH2 108 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 ARMC5Q96C12 935 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 HOOK2Q96ED9 719 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 TEPSINQ96N21 525 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 PTPN18Q99952 460 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 EFCC1Q9HA90 598 aa10.9□□□□□ -0.66
VRK1-206ENST00000557222 ZCCHC17Q9NP64 241 aaKnown RBP10.9□□□□□ -0.66
VRK1-206ENST00000557222 KIF16BQ96L93 1317 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 SLC19A1P41440 591 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 CRKP46108 304 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 GYG1P46976 350 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 CAVIN4Q5BKX8 364 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 BRICD5Q6PL45 260 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.89□□□□□ -0.67
VRK1-206ENST00000557222 VPS37DQ86XT2 251 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 FAM160A2Q8N612 972 aaPredicted RBP10.89□□□□□ -0.67
VRK1-206ENST00000557222 OPTNQ96CV9 577 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 KAZALD1Q96I82 304 aa10.89□□□□□ -0.67
VRK1-206ENST00000557222 TDRD3Q9H7E2 651 aaKnown RBP10.89□□□□□ -0.67
VRK1-206ENST00000557222 AOX1Q06278 1338 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 WDHD1O75717 1129 aaPredicted RBP10.88□□□□□ -0.67
VRK1-206ENST00000557222 PDE8BO95263 885 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 USP46P62068 366 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 AMHR2Q16671 573 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 SLC4A10Q6U841 1118 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 RNF19BQ6ZMZ0 732 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 FAM83AQ86UY5 434 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.88□□□□□ -0.67
VRK1-206ENST00000557222 CD99L2Q8TCZ2 262 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 SUCLG2Q96I99 432 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 ZDHHC15Q96MV8 337 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 PUS3Q9BZE2 481 aaKnown RBP10.88□□□□□ -0.67
VRK1-206ENST00000557222 ELP3Q9H9T3 547 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 ZFYVE28Q9HCC9 887 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 JAG2Q9Y219 1238 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 CSADQ9Y600 493 aa10.88□□□□□ -0.67
VRK1-206ENST00000557222 MAST3O60307 1309 aa10.87□□□□□ -0.67
VRK1-206ENST00000557222 PTPRCP08575 1304 aa10.87□□□□□ -0.67
VRK1-206ENST00000557222 GFRA3O60609 400 aa10.87□□□□□ -0.67
VRK1-206ENST00000557222 NBPF7P0C2Y1 421 aaPredicted RBP10.87□□□□□ -0.67
VRK1-206ENST00000557222 NBPF11Q86T75 865 aa10.87□□□□□ -0.67
VRK1-206ENST00000557222 BRI3BPQ8WY22 251 aa10.87□□□□□ -0.67
VRK1-206ENST00000557222 TEKT1Q969V4 418 aa10.87□□□□□ -0.67
VRK1-206ENST00000557222 BICC1Q9H694 974 aaKnown RBP10.87□□□□□ -0.67
VRK1-206ENST00000557222 CCL15-CCL14A0A0B4J2E2 113 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 SPDYE5A6NIY4 337 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 TCP10L2B9ZVM9 353 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 FRAT2O75474 233 aaPredicted RBP10.86□□□□□ -0.67
VRK1-206ENST00000557222 GNRH1P01148 92 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 CETPP11597 493 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 SSTR3P32745 418 aaPredicted RBP10.86□□□□□ -0.67
VRK1-206ENST00000557222 VGLL4Q14135 290 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 LAPTM4AQ15012 233 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 TAF1CQ15572 869 aaPredicted RBP10.86□□□□□ -0.67
VRK1-206ENST00000557222 CCL15Q16663 113 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 METTL24Q5JXM2 366 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 HHIPL2Q6UWX4 724 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 ERO1BQ86YB8 467 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 VGLL2Q8N8G2 317 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 HLA-CQ95604 372 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 TMEM39BQ9GZU3 492 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 TMOD2Q9NZR1 351 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 CEP290O15078 2479 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 ARAP2Q8WZ64 1704 aa10.86□□□□□ -0.67
VRK1-206ENST00000557222 ZNF521Q96K83 1311 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 RBBP6Q7Z6E9 1792 aaKnown RBP10.85□□□□□ -0.67
VRK1-206ENST00000557222 BRCA2P51587 3418 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 HOXA2O43364 376 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 TLR2O60603 784 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 IFIT1P09914 478 aaKnown RBP10.85□□□□□ -0.67
VRK1-206ENST00000557222 PRMT2P55345 433 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 Q3C1V9 767 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 DCAF15Q66K64 600 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 APOBEC3HQ6NTF7 200 aaKnown RBP10.85□□□□□ -0.67
VRK1-206ENST00000557222 ANKRD44Q8N8A2 993 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 WDR66Q8TBY9 1149 aa10.85□□□□□ -0.67
VRK1-206ENST00000557222 ZNF333Q96JL9 665 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms