RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PARD6BQ9BYG5 372 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 MRPL44Q9H9J2 332 aaKnown RBP13.04□□□□□ -0.32
SRP54-213ENST00000556994 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 MRFAP1Q9Y605 127 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 RIC1Q4ADV7 1423 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 MYH7P12883 1935 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 SOWAHDA6NJG2 315 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 SNAP23O00161 211 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 TEX33O43247 280 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
SRP54-213ENST00000556994 ZNF18P17022 549 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 ATF3P18847 181 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 GYS2P54840 703 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 KIFC2Q96AC6 838 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
SRP54-213ENST00000556994 FBXO2Q9UK22 296 aaPredicted RBP13.04□□□□□ -0.32
SRP54-213ENST00000556994 MMP1P03956 469 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 CASP1P29466 404 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 OAS2P29728 719 aaKnown RBP13.03□□□□□ -0.32
SRP54-213ENST00000556994 STX17P56962 302 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 HLFQ16534 295 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 KLHL10Q6JEL2 608 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
SRP54-213ENST00000556994 CCDC12Q8WUD4 166 aaPredicted RBP13.03□□□□□ -0.32
SRP54-213ENST00000556994 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
SRP54-213ENST00000556994 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
SRP54-213ENST00000556994 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
SRP54-213ENST00000556994 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 PCDH11XQ9BZA7 1347 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 PCDH11YQ9BZA8 1340 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 AKAP11Q9UKA4 1901 aa13.03□□□□□ -0.32
SRP54-213ENST00000556994 ERVV-2B6SEH9 535 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 FMNL1O95466 1100 aaPredicted RBP13.02□□□□□ -0.32
SRP54-213ENST00000556994 TPM1P09493 284 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 MORC3Q14149 939 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 SGMS1Q86VZ5 419 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 GPR161Q8N6U8 529 aaKnown RBP13.02□□□□□ -0.32
SRP54-213ENST00000556994 TTLL11Q8NHH1 800 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 OXER1Q8TDS5 423 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 ARMT1Q9H993 441 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 RAI14Q9P0K7 980 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 HOOK1Q9UJC3 728 aaKnown RBP13.02□□□□□ -0.32
SRP54-213ENST00000556994 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.32
SRP54-213ENST00000556994 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 PRKAB2O43741 272 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 PTPREP23469 700 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.33
SRP54-213ENST00000556994 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.33
SRP54-213ENST00000556994 SMC1AQ14683 1233 aaKnown RBP13.02□□□□□ -0.33
SRP54-213ENST00000556994 TTF1Q15361 905 aaPredicted RBP13.02□□□□□ -0.33
SRP54-213ENST00000556994 UBE3CQ15386 1083 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 SAFBQ15424 915 aaKnown RBP eCLIP13.02□□□□□ -0.33
SRP54-213ENST00000556994 RSRC2Q7L4I2 434 aaKnown RBP13.02□□□□□ -0.33
SRP54-213ENST00000556994 IFNL3Q8IZI9 196 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 ENOX1Q8TC92 643 aaKnown RBP13.02□□□□□ -0.33
SRP54-213ENST00000556994 NAPBQ9H115 298 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 TBC1D2BQ9UPU7 963 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
SRP54-213ENST00000556994 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 MYO1BO43795 1136 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 COBLO75128 1261 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 MBD4O95243 580 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 AFMP43652 599 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 NR1I3Q14994 352 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 KIF6Q6ZMV9 814 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 DNAJC10Q8IXB1 793 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 MAGEB6Q8N7X4 407 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 MLKLQ8NB16 471 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 ARFGAP3Q9NP61 516 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 PUF60Q9UHX1 559 aaKnown RBP13.01□□□□□ -0.33
SRP54-213ENST00000556994 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
SRP54-213ENST00000556994 NUP133Q8WUM0 1156 aa13.01□□□□□ -0.33
SRP54-213ENST00000556994 ABCC12Q96J65 1359 aa13□□□□□ -0.33
SRP54-213ENST00000556994 ANKRD18BA2A2Z9 1011 aa13□□□□□ -0.33
SRP54-213ENST00000556994 GOLGA6L9A6NEM1 432 aa13□□□□□ -0.33
SRP54-213ENST00000556994 FAM205CA6NFA0 338 aa13□□□□□ -0.33
SRP54-213ENST00000556994 ACTN4O43707 911 aaKnown RBP13□□□□□ -0.33
SRP54-213ENST00000556994 PDE8BO95263 885 aa13□□□□□ -0.33
SRP54-213ENST00000556994 TFRCP02786 760 aaKnown RBP13□□□□□ -0.33
SRP54-213ENST00000556994 IFNAR1P17181 557 aa13□□□□□ -0.33
SRP54-213ENST00000556994 LIFRP42702 1097 aa13□□□□□ -0.33
SRP54-213ENST00000556994 FAM193AP78312 1265 aa13□□□□□ -0.33
SRP54-213ENST00000556994 RBL2Q08999 1139 aa13□□□□□ -0.33
SRP54-213ENST00000556994 NT5DC1Q5TFE4 455 aa13□□□□□ -0.33
SRP54-213ENST00000556994 RAD9BQ6WBX8 426 aa13□□□□□ -0.33
SRP54-213ENST00000556994 SMYD4Q8IYR2 804 aaPredicted RBP13□□□□□ -0.33
SRP54-213ENST00000556994 VGLL2Q8N8G2 317 aa13□□□□□ -0.33
SRP54-213ENST00000556994 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
SRP54-213ENST00000556994 TMEM51Q9NW97 253 aa13□□□□□ -0.33
SRP54-213ENST00000556994 MST1RQ04912 1400 aa13□□□□□ -0.33
SRP54-213ENST00000556994 A0A087X0B3 334 aa13□□□□□ -0.33
SRP54-213ENST00000556994 hCG_1642624A0A1W2PR95 340 aa13□□□□□ -0.33
SRP54-213ENST00000556994 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
SRP54-213ENST00000556994 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
SRP54-213ENST00000556994 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
SRP54-213ENST00000556994 RTN1Q16799 776 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms