RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 FLT1P17948 1338 aa17.03■□□□□ 0.32
SLIRP-207ENST00000556831 ZNF532Q9HCE3 1301 aa17.03■□□□□ 0.32
SLIRP-207ENST00000556831 TM4SF4P48230 202 aa17.03■□□□□ 0.32
SLIRP-207ENST00000556831 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
SLIRP-207ENST00000556831 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
SLIRP-207ENST00000556831 PTPN18Q99952 460 aa17.03■□□□□ 0.32
SLIRP-207ENST00000556831 CRNKL1Q9BZJ0 848 aaKnown RBP17.03■□□□□ 0.32
SLIRP-207ENST00000556831 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.03■□□□□ 0.32
SLIRP-207ENST00000556831 SPDYE5A6NIY4 337 aa17.02■□□□□ 0.32
SLIRP-207ENST00000556831 MX1P20591 662 aa17.02■□□□□ 0.32
SLIRP-207ENST00000556831 GTF2A2P52657 109 aa17.02■□□□□ 0.32
SLIRP-207ENST00000556831 MS4A4AQ96JQ5 239 aa17.02■□□□□ 0.32
SLIRP-207ENST00000556831 GLRX3O76003 335 aaKnown RBP17.01■□□□□ 0.31
SLIRP-207ENST00000556831 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
SLIRP-207ENST00000556831 RRP1BQ14684 758 aaKnown RBP17.01■□□□□ 0.31
SLIRP-207ENST00000556831 SLC4A8Q2Y0W8 1093 aa17.01■□□□□ 0.31
SLIRP-207ENST00000556831 CCDC84Q86UT8 332 aaPredicted RBP17.01■□□□□ 0.31
SLIRP-207ENST00000556831 DDRGK1Q96HY6 314 aa17.01■□□□□ 0.31
SLIRP-207ENST00000556831 PI4KBQ9UBF8 816 aa17.01■□□□□ 0.31
SLIRP-207ENST00000556831 HERC5Q9UII4 1024 aaKnown RBP17.01■□□□□ 0.31
SLIRP-207ENST00000556831 ZNF112Q9UJU3 913 aa17.01■□□□□ 0.31
SLIRP-207ENST00000556831 MYH7P12883 1935 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 PPATQ06203 517 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 PPIL2Q13356 520 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 SNAPC2Q13487 334 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 IFNL1Q8IU54 200 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 SCYL3Q8IZE3 742 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 OTUD7AQ8TE49 926 aaPredicted RBP17■□□□□ 0.31
SLIRP-207ENST00000556831 BRI3BPQ8WY22 251 aa17■□□□□ 0.31
SLIRP-207ENST00000556831 SAP30BPQ9UHR5 308 aaKnown RBP17■□□□□ 0.31
SLIRP-207ENST00000556831 CCL15-CCL14A0A0B4J2E2 113 aa16.99■□□□□ 0.31
SLIRP-207ENST00000556831 TBC1D12O60347 775 aa16.99■□□□□ 0.31
SLIRP-207ENST00000556831 CETPP11597 493 aa16.99■□□□□ 0.31
SLIRP-207ENST00000556831 ADD2P35612 726 aa16.99■□□□□ 0.31
SLIRP-207ENST00000556831 CAP1Q01518 475 aa16.99■□□□□ 0.31
SLIRP-207ENST00000556831 EVX2Q03828 476 aa16.99■□□□□ 0.31
SLIRP-207ENST00000556831 CCL15Q16663 113 aa16.99■□□□□ 0.31
SLIRP-207ENST00000556831 SHROOM1Q2M3G4 852 aaPredicted RBP16.99■□□□□ 0.31
SLIRP-207ENST00000556831 NOL9Q5SY16 702 aaKnown RBP16.99■□□□□ 0.31
SLIRP-207ENST00000556831 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 IRF6O14896 467 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 CTNND1O60716 968 aaKnown RBP16.98■□□□□ 0.31
SLIRP-207ENST00000556831 UBE3CQ15386 1083 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 TTC6Q86TZ1 520 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 KBTBD3Q8NAB2 608 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 DOCK1Q14185 1865 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 NAV1Q8NEY1 1877 aa16.98■□□□□ 0.31
SLIRP-207ENST00000556831 DDX60LQ5H9U9 1706 aaKnown RBP16.97■□□□□ 0.31
SLIRP-207ENST00000556831 MBD4O95243 580 aa16.97■□□□□ 0.31
SLIRP-207ENST00000556831 POLR3DP05423 398 aaPredicted RBP16.97■□□□□ 0.31
SLIRP-207ENST00000556831 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
SLIRP-207ENST00000556831 FOXP4Q8IVH2 680 aaPredicted RBP16.97■□□□□ 0.31
SLIRP-207ENST00000556831 FAM43AQ8N2R8 423 aa16.97■□□□□ 0.31
SLIRP-207ENST00000556831 RIOK1Q9BRS2 568 aaKnown RBP16.97■□□□□ 0.31
SLIRP-207ENST00000556831 FSD1Q9BTV5 496 aa16.97■□□□□ 0.31
SLIRP-207ENST00000556831 ZSWIM8A7E2V4 1837 aa16.97■□□□□ 0.31
SLIRP-207ENST00000556831 ATAD5Q96QE3 1844 aa16.97■□□□□ 0.31
SLIRP-207ENST00000556831 MYH1P12882 1939 aa16.97■□□□□ 0.31
SLIRP-207ENST00000556831 TCRBV5S4A2TA0A5A2 114 aa16.96■□□□□ 0.31
SLIRP-207ENST00000556831 TESPA1A2RU30 521 aaPredicted RBP16.96■□□□□ 0.31
SLIRP-207ENST00000556831 JAG1P78504 1218 aa16.96■□□□□ 0.31
SLIRP-207ENST00000556831 MAP3K10Q02779 954 aa16.96■□□□□ 0.31
SLIRP-207ENST00000556831 LCORLQ8N3X6 602 aa16.96■□□□□ 0.31
SLIRP-207ENST00000556831 ZNF296Q8WUU4 475 aaPredicted RBP16.96■□□□□ 0.31
SLIRP-207ENST00000556831 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
SLIRP-207ENST00000556831 DNAJC18Q9H819 358 aa16.96■□□□□ 0.31
SLIRP-207ENST00000556831 ARMT1Q9H993 441 aa16.96■□□□□ 0.31
SLIRP-207ENST00000556831 MCM9Q9NXL9 1143 aa16.96■□□□□ 0.31
SLIRP-207ENST00000556831 CRHR2Q13324 411 aa16.95■□□□□ 0.3
SLIRP-207ENST00000556831 MOGSQ13724 837 aa16.95■□□□□ 0.3
SLIRP-207ENST00000556831 SMC5Q8IY18 1101 aa16.95■□□□□ 0.3
SLIRP-207ENST00000556831 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
SLIRP-207ENST00000556831 SERPINB13Q9UIV8 391 aa16.95■□□□□ 0.3
SLIRP-207ENST00000556831 ZHX2Q9Y6X8 837 aa16.95■□□□□ 0.3
SLIRP-207ENST00000556831 PTPRFP10586 1907 aa16.94■□□□□ 0.3
SLIRP-207ENST00000556831 GPR25O00155 361 aa16.94■□□□□ 0.3
SLIRP-207ENST00000556831 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
SLIRP-207ENST00000556831 TAF1CQ15572 869 aaPredicted RBP16.94■□□□□ 0.3
SLIRP-207ENST00000556831 CHD1LQ86WJ1 897 aa16.94■□□□□ 0.3
SLIRP-207ENST00000556831 PI4K2BQ8TCG2 481 aa16.94■□□□□ 0.3
SLIRP-207ENST00000556831 APPBP2Q92624 585 aa16.94■□□□□ 0.3
SLIRP-207ENST00000556831 AS3MTQ9HBK9 375 aa16.94■□□□□ 0.3
SLIRP-207ENST00000556831 ATP8A2Q9NTI2 1148 aa16.94■□□□□ 0.3
SLIRP-207ENST00000556831 HTTP42858 3142 aa16.94■□□□□ 0.3
SLIRP-207ENST00000556831 BTBD19C9JJ37 291 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 CXCL11O14625 94 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 ASNSP08243 561 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 PTPRAP18433 802 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 CAP2P40123 477 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
SLIRP-207ENST00000556831 SDR42E1Q8WUS8 393 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 EHD4Q9H223 541 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 ZFYVE28Q9HCC9 887 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 SLC4A4Q9Y6R1 1079 aa16.93■□□□□ 0.3
SLIRP-207ENST00000556831 IGHDP01880 384 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms