RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 EPN3Q9H201 632 aa15.57■□□□□ 0.08
SHMT2-226ENST00000556825 NRXN1Q9ULB1 1477 aa15.57■□□□□ 0.08
SHMT2-226ENST00000556825 CBFA2T2O43439 604 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 SMIM24O75264 130 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 ST3GAL1Q11201 340 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 SFMBT2Q5VUG0 894 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 CEP85Q6P2H3 762 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 TOGARAM2Q6ZUX3 1019 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 JAKMIP1Q96N16 626 aaKnown RBP15.56■□□□□ 0.08
SHMT2-226ENST00000556825 PLEKHF1Q96S99 279 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 MYO1AQ9UBC5 1043 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 CSB-PGBD3P0DP91 1061 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 CCDC38Q502W7 563 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 SDR16C5Q8N3Y7 309 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 CCDC148Q8NFR7 591 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 PHACTR1Q9C0D0 580 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 ZFATQ9P243 1243 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 PIK3C2BO00750 1634 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 ARHGEF40Q8TER5 1519 aa15.56■□□□□ 0.08
SHMT2-226ENST00000556825 DTNBO60941 627 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 ANP32DO95626 131 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 CCDC15Q0P6D6 951 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 MKRN4PQ13434 485 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-226ENST00000556825 KARSQ15046 597 aaKnown RBP15.55■□□□□ 0.08
SHMT2-226ENST00000556825 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-226ENST00000556825 APLFQ8IW19 511 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-226ENST00000556825 ZNF570Q96NI8 536 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 FMNL2Q96PY5 1086 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 A0A1B0GVG6 124 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 M0R2C6 588 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 CYP27B1O15528 508 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 VAMP4O75379 141 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 PDCLQ13371 301 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 MYBPC3Q14896 1274 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 AKNAD1Q5T1N1 836 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 VSTM4Q8IW00 320 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 CCHCR1Q8TD31 782 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 TBC1D31Q96DN5 1066 aa15.55■□□□□ 0.08
SHMT2-226ENST00000556825 NAT1P18440 290 aa15.54■□□□□ 0.08
SHMT2-226ENST00000556825 NUGGCQ68CJ6 796 aa15.54■□□□□ 0.08
SHMT2-226ENST00000556825 FAM114A1Q8IWE2 563 aa15.54■□□□□ 0.08
SHMT2-226ENST00000556825 NOA1Q8NC60 698 aaKnown RBP15.54■□□□□ 0.08
SHMT2-226ENST00000556825 ARPC5LQ9BPX5 153 aa15.54■□□□□ 0.08
SHMT2-226ENST00000556825 ZCWPW1Q9H0M4 648 aa15.54■□□□□ 0.08
SHMT2-226ENST00000556825 A0A1B0GVL5 298 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 LRRC10BA6NIK2 292 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 CREB3O43889 395 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 SASH1O94885 1247 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 EPB41P11171 864 aaKnown RBP15.53■□□□□ 0.08
SHMT2-226ENST00000556825 TOP1P11387 765 aaKnown RBP15.53■□□□□ 0.08
SHMT2-226ENST00000556825 CTCFP49711 727 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-226ENST00000556825 USP14P54578 494 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 GOLGA8FQ08AF8 430 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 GOLGA8DPQ0D2H9 430 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 MPP3Q13368 585 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 NCAPHQ15003 741 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 CCDC73Q6ZRK6 1079 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 Q6ZUG5 572 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 RILPL2Q969X0 211 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 ANKIB1Q9P2G1 1089 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 CTAGE9A4FU28 777 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 KIF5CO60282 957 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 HDGFP51858 240 aaKnown RBP15.53■□□□□ 0.08
SHMT2-226ENST00000556825 PPP1R15BQ5SWA1 713 aa15.53■□□□□ 0.08
SHMT2-226ENST00000556825 PREX1Q8TCU6 1659 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 DNM1LO00429 736 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 OPLAHO14841 1288 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 MYO1BO43795 1136 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 LUC7L3O95232 432 aaKnown RBP15.52■□□□□ 0.08
SHMT2-226ENST00000556825 EIF2S2P20042 333 aaKnown RBP15.52■□□□□ 0.08
SHMT2-226ENST00000556825 GJA8P48165 433 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 IDI1Q13907 227 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 DPY19L2Q6NUT2 758 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 RASEFQ8IZ41 740 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 ENGASEQ8NFI3 743 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 CNKSR1Q969H4 720 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 GOLPH3LQ9H4A5 285 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 MRPL44Q9H9J2 332 aaKnown RBP15.52■□□□□ 0.08
SHMT2-226ENST00000556825 CFAP45Q9UL16 551 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 ZNF510Q9Y2H8 683 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.08
SHMT2-226ENST00000556825 AGLP35573 1532 aa15.52■□□□□ 0.07
SHMT2-226ENST00000556825 CDC25CP30307 473 aa15.52■□□□□ 0.07
SHMT2-226ENST00000556825 LSP1P33241 339 aa15.52■□□□□ 0.07
SHMT2-226ENST00000556825 UBASH3AP57075 661 aa15.52■□□□□ 0.07
SHMT2-226ENST00000556825 ELF3P78545 371 aaPredicted RBP15.52■□□□□ 0.07
SHMT2-226ENST00000556825 DYNC1I2Q13409 638 aaKnown RBP15.52■□□□□ 0.07
SHMT2-226ENST00000556825 ANKRD20A8PQ5CZ79 823 aa15.52■□□□□ 0.07
SHMT2-226ENST00000556825 ARMC9Q7Z3E5 817 aa15.52■□□□□ 0.07
SHMT2-226ENST00000556825 FBXW7Q969H0 707 aa15.52■□□□□ 0.07
SHMT2-226ENST00000556825 C14orf93Q9H972 538 aaKnown RBP15.52■□□□□ 0.07
SHMT2-226ENST00000556825 SLC5A4Q9NY91 659 aa15.52■□□□□ 0.07
SHMT2-226ENST00000556825 SETBP1Q9Y6X0 1596 aa15.51■□□□□ 0.07
SHMT2-226ENST00000556825 TARSL2A2RTX5 802 aaKnown RBP15.51■□□□□ 0.07
SHMT2-226ENST00000556825 RASSF10A6NK89 507 aa15.51■□□□□ 0.07
SHMT2-226ENST00000556825 SRRM3A6NNA2 597 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-226ENST00000556825 DNAJC8O75937 253 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-226ENST00000556825 EIF4BP23588 611 aaKnown RBP15.51■□□□□ 0.07
SHMT2-226ENST00000556825 AKAP17AQ02040 695 aaKnown RBP15.51■□□□□ 0.07
SHMT2-226ENST00000556825 RIPK1Q13546 671 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms