RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 POLR3DP05423 398 aaPredicted RBP20.98■□□□□ 0.95
SHMT2-225ENST00000556798 MAP3K9P80192 1104 aa20.98■□□□□ 0.95
SHMT2-225ENST00000556798 CWC27Q6UX04 472 aaKnown RBP20.98■□□□□ 0.95
SHMT2-225ENST00000556798 ZKSCAN4Q969J2 545 aaPredicted RBP20.98■□□□□ 0.95
SHMT2-225ENST00000556798 ELP3Q9H9T3 547 aa20.98■□□□□ 0.95
SHMT2-225ENST00000556798 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.98■□□□□ 0.95
SHMT2-225ENST00000556798 EPB41L4AQ9HCS5 686 aaPredicted RBP20.98■□□□□ 0.95
SHMT2-225ENST00000556798 WDR33Q9C0J8 1336 aaKnown RBP20.98■□□□□ 0.95
SHMT2-225ENST00000556798 PHIPQ8WWQ0 1821 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 CYP2D7A0A087X1C5 515 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 GSG1L2A8MUP6 293 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 SLC10A3P09131 477 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 PLCD1P51178 756 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 MAP3K10Q02779 954 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 MKRN3Q13064 507 aaKnown RBP20.97■□□□□ 0.95
SHMT2-225ENST00000556798 MCMDC2Q4G0Z9 681 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 ZNF589Q86UQ0 364 aaPredicted RBP20.97■□□□□ 0.95
SHMT2-225ENST00000556798 TICAM2Q86XR7 235 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 CRACR2BQ8N4Y2 399 aaPredicted RBP20.97■□□□□ 0.95
SHMT2-225ENST00000556798 DNAJC18Q9H819 358 aa20.97■□□□□ 0.95
SHMT2-225ENST00000556798 PHF20L1A8MW92 1017 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 FAM155AB1AL88 458 aaPredicted RBP20.96■□□□□ 0.95
SHMT2-225ENST00000556798 SMIM22K7EJ46 135 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 TBC1D12O60347 775 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 AOC2O75106 756 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 APPP05067 770 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 GNAT2P19087 354 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 ECE1P42892 770 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 TTC6Q86TZ1 520 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 TRIM34Q9BYJ4 488 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 ZNF112Q9UJU3 913 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 CSADQ9Y600 493 aa20.96■□□□□ 0.95
SHMT2-225ENST00000556798 USP17L12C9JPN9 530 aa20.95■□□□□ 0.94
SHMT2-225ENST00000556798 USP17L21D6R901 530 aa20.95■□□□□ 0.94
SHMT2-225ENST00000556798 HIP1O00291 1037 aa20.95■□□□□ 0.94
SHMT2-225ENST00000556798 VPS53Q5VIR6 699 aa20.95■□□□□ 0.94
SHMT2-225ENST00000556798 CNKSR2Q8WXI2 1034 aa20.95■□□□□ 0.94
SHMT2-225ENST00000556798 SLC10A4Q96EP9 437 aa20.95■□□□□ 0.94
SHMT2-225ENST00000556798 HERC5Q9UII4 1024 aaKnown RBP20.95■□□□□ 0.94
SHMT2-225ENST00000556798 SNCAIPQ9Y6H5 919 aa20.95■□□□□ 0.94
SHMT2-225ENST00000556798 PATL2C9JE40 543 aaKnown RBP20.94■□□□□ 0.94
SHMT2-225ENST00000556798 FOXP2O15409 715 aa20.94■□□□□ 0.94
SHMT2-225ENST00000556798 TDO2P48775 406 aa20.94■□□□□ 0.94
SHMT2-225ENST00000556798 RRP1BQ14684 758 aaKnown RBP20.94■□□□□ 0.94
SHMT2-225ENST00000556798 CTR9Q6PD62 1173 aa20.94■□□□□ 0.94
SHMT2-225ENST00000556798 FOXP4Q8IVH2 680 aaPredicted RBP20.94■□□□□ 0.94
SHMT2-225ENST00000556798 CCDC102AQ96A19 550 aa20.94■□□□□ 0.94
SHMT2-225ENST00000556798 ZIC5Q96T25 663 aa20.94■□□□□ 0.94
SHMT2-225ENST00000556798 SERPINB13Q9UIV8 391 aa20.94■□□□□ 0.94
SHMT2-225ENST00000556798 CCDC171Q6TFL3 1326 aa20.94■□□□□ 0.94
SHMT2-225ENST00000556798 PTPRFP10586 1907 aa20.94■□□□□ 0.94
SHMT2-225ENST00000556798 LAMA4Q16363 1823 aa20.93■□□□□ 0.94
SHMT2-225ENST00000556798 UNCXA6NJT0 531 aa20.93■□□□□ 0.94
SHMT2-225ENST00000556798 BMP2KLQ5H9B9 411 aa20.93■□□□□ 0.94
SHMT2-225ENST00000556798 METTL16Q86W50 562 aaKnown RBP20.93■□□□□ 0.94
SHMT2-225ENST00000556798 AMOTL1Q8IY63 956 aa20.93■□□□□ 0.94
SHMT2-225ENST00000556798 IFNL3Q8IZI9 196 aa20.93■□□□□ 0.94
SHMT2-225ENST00000556798 WNK4Q96J92 1243 aa20.93■□□□□ 0.94
SHMT2-225ENST00000556798 EHD4Q9H223 541 aa20.93■□□□□ 0.94
SHMT2-225ENST00000556798 IL25Q9H293 177 aa20.93■□□□□ 0.94
SHMT2-225ENST00000556798 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.93■□□□□ 0.94
SHMT2-225ENST00000556798 ARPP21Q9UBL0 812 aaPredicted RBP20.93■□□□□ 0.94
SHMT2-225ENST00000556798 CHMLP26374 656 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 GJA5P36382 358 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 C12orf60Q5U649 245 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 GIMAP6Q6P9H5 292 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 SLC44A5Q8NCS7 719 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 OPTNQ96CV9 577 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 DYNLL2Q96FJ2 89 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 OTUD5Q96G74 571 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 PCNTO95613 3336 aa20.92■□□□□ 0.94
SHMT2-225ENST00000556798 MINDY4BA8MYZ0 360 aa20.91■□□□□ 0.94
SHMT2-225ENST00000556798 GDF11O95390 407 aa20.91■□□□□ 0.94
SHMT2-225ENST00000556798 GABPAQ06546 454 aa20.91■□□□□ 0.94
SHMT2-225ENST00000556798 SHROOM1Q2M3G4 852 aaPredicted RBP20.91■□□□□ 0.94
SHMT2-225ENST00000556798 NOL9Q5SY16 702 aaKnown RBP20.91■□□□□ 0.94
SHMT2-225ENST00000556798 SPRYD7Q5W111 196 aa20.91■□□□□ 0.94
SHMT2-225ENST00000556798 SCYL3Q8IZE3 742 aa20.91■□□□□ 0.94
SHMT2-225ENST00000556798 NACAP1Q9BZK3 213 aa20.91■□□□□ 0.94
SHMT2-225ENST00000556798 NAPBQ9H115 298 aa20.91■□□□□ 0.94
SHMT2-225ENST00000556798 SPDYE5A6NIY4 337 aa20.9■□□□□ 0.94
SHMT2-225ENST00000556798 CTNND1O60716 968 aaKnown RBP20.9■□□□□ 0.94
SHMT2-225ENST00000556798 SHMT1P34896 483 aa20.9■□□□□ 0.94
SHMT2-225ENST00000556798 NOGQ13253 232 aa20.9■□□□□ 0.94
SHMT2-225ENST00000556798 CCDC84Q86UT8 332 aaPredicted RBP20.9■□□□□ 0.94
SHMT2-225ENST00000556798 STK11IPQ8N1F8 1099 aa20.9■□□□□ 0.94
SHMT2-225ENST00000556798 HSPD1P10809 573 aaKnown RBP20.89■□□□□ 0.93
SHMT2-225ENST00000556798 CAP2P40123 477 aa20.89■□□□□ 0.93
SHMT2-225ENST00000556798 MFAP1P55081 439 aaKnown RBP20.89■□□□□ 0.93
SHMT2-225ENST00000556798 KIF23Q02241 960 aaPredicted RBP20.89■□□□□ 0.93
SHMT2-225ENST00000556798 SBK1Q52WX2 424 aa20.89■□□□□ 0.93
SHMT2-225ENST00000556798 ERO1BQ86YB8 467 aa20.89■□□□□ 0.93
SHMT2-225ENST00000556798 PICK1Q9NRD5 415 aa20.89■□□□□ 0.93
SHMT2-225ENST00000556798 ZBTB48P10074 688 aaPredicted RBP20.88■□□□□ 0.93
SHMT2-225ENST00000556798 JAG1P78504 1218 aa20.88■□□□□ 0.93
SHMT2-225ENST00000556798 TATDN1Q6P1N9 297 aa20.88■□□□□ 0.93
SHMT2-225ENST00000556798 ROBO3Q96MS0 1386 aa20.87■□□□□ 0.93
SHMT2-225ENST00000556798 RAD50Q92878 1312 aa20.87■□□□□ 0.93
SHMT2-225ENST00000556798 PTPRAP18433 802 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms