RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
MTHFD1-214ENST00000556771 WNK4Q96J92 1243 aa12.74□□□□□ -0.37
MTHFD1-214ENST00000556771 CLMNQ96JQ2 1002 aa12.74□□□□□ -0.37
MTHFD1-214ENST00000556771 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
MTHFD1-214ENST00000556771 SPDYE5A6NIY4 337 aa12.73□□□□□ -0.37
MTHFD1-214ENST00000556771 FOXP4Q8IVH2 680 aaPredicted RBP12.73□□□□□ -0.37
MTHFD1-214ENST00000556771 APPBP2Q92624 585 aa12.73□□□□□ -0.37
MTHFD1-214ENST00000556771 EVI5LQ96CN4 794 aa12.73□□□□□ -0.37
MTHFD1-214ENST00000556771 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
MTHFD1-214ENST00000556771 SAGE1Q9NXZ1 904 aa12.73□□□□□ -0.37
MTHFD1-214ENST00000556771 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 RNF113AO15541 343 aaKnown RBP12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 MBD4O95243 580 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 NEFLP07196 543 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 TM4SF4P48230 202 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 CTCFP49711 727 aaPredicted RBP12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 OPTNQ96CV9 577 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 ELP3Q9H9T3 547 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 ATP8A2Q9NTI2 1148 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 SNCAIPQ9Y6H5 919 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 MYH1P12882 1939 aa12.72□□□□□ -0.37
MTHFD1-214ENST00000556771 INPP5BP32019 993 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 GTF2A2P52657 109 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 PPATQ06203 517 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 PPIL2Q13356 520 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 SCYL3Q8IZE3 742 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 LCORLQ8N3X6 602 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 CRACR2BQ8N4Y2 399 aaPredicted RBP12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 ZIC5Q96T25 663 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 EHD4Q9H223 541 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 PICK1Q9NRD5 415 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 GINM1Q9NU53 330 aa12.71□□□□□ -0.37
MTHFD1-214ENST00000556771 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.38
MTHFD1-214ENST00000556771 NAV1Q8NEY1 1877 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 ALDH1A1P00352 501 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 GNAT2P19087 354 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 OTUD7BQ6GQQ9 843 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 SAP30BPQ9UHR5 308 aaKnown RBP12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
MTHFD1-214ENST00000556771 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 FOXN1O15353 648 aa12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 GJA5P36382 358 aa12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 SNAPC2Q13487 334 aa12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 PUS7LQ9H0K6 701 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 DCP1AQ9NPI6 582 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 MCM9Q9NXL9 1143 aa12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
MTHFD1-214ENST00000556771 CXCL11O14625 94 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 CETPP11597 493 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 CAP2P40123 477 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 CENPQQ7L2Z9 268 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 SDR42E1Q8WUS8 393 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 STRBPQ96SI9 672 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 CFHR5Q9BXR6 569 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 PRDM10Q9NQV6 1147 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 KCNH4Q9UQ05 1017 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 SLC4A4Q9Y6R1 1079 aa12.68□□□□□ -0.38
MTHFD1-214ENST00000556771 TRIM6-TRIM34B2RNG4 842 aa12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 IRF6O14896 467 aa12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 GPAA1O43292 621 aa12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 ASNSP08243 561 aa12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 HSPA8P11142 646 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 PTPRAP18433 802 aa12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 SLFNL1Q499Z3 407 aa12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 ZCCHC17Q9NP64 241 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 ARPP21Q9UBL0 812 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
MTHFD1-214ENST00000556771 CCL15-CCL14A0A0B4J2E2 113 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 FAM196BA6NMK8 535 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 HIP1O00291 1037 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 TRPA1O75762 1119 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 CHGBP05060 677 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 GABPAQ06546 454 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 CCL15Q16663 113 aa12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 NOM1Q5C9Z4 860 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-214ENST00000556771 TATDN1Q6P1N9 297 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms