RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 IQCA1Q86XH1 822 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 TMTC2Q8N394 836 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 ZC3H15Q8WU90 426 aaKnown RBP10.87□□□□□ -0.67
ACTN1-218ENST00000556343 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 KIF2CQ99661 725 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 DDX4Q9NQI0 724 aaKnown RBP10.87□□□□□ -0.67
ACTN1-218ENST00000556343 FAM198AQ9UFP1 575 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 HERC5Q9UII4 1024 aaKnown RBP10.87□□□□□ -0.67
ACTN1-218ENST00000556343 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 PPP2R3BQ9Y5P8 575 aa10.87□□□□□ -0.67
ACTN1-218ENST00000556343 TSPY2A6NKD2 308 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 FGRP09769 529 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 CYP2D6P10635 497 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 EPHX2P34913 555 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 CDK8P49336 464 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 CACNB3P54284 484 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 SYNE3Q6ZMZ3 975 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 TBC1D10CQ8IV04 446 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 ZSCAN31Q96LW9 406 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-218ENST00000556343 CCDC17Q96LX7 622 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 CSRNP1Q96S65 589 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 UBAC1Q9BSL1 405 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 UPF3BQ9BZI7 483 aaKnown RBP10.86□□□□□ -0.67
ACTN1-218ENST00000556343 PSME4Q14997 1843 aa10.86□□□□□ -0.67
ACTN1-218ENST00000556343 PITPNM2Q9BZ72 1349 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 SHTN1A0MZ66 631 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 B4E1Z4 1266 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 IFIT3O14879 490 aaKnown RBP10.85□□□□□ -0.67
ACTN1-218ENST00000556343 PRC1O43663 620 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 KDM4AO75164 1064 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 TSPY3P0CV98 308 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 TSPY8P0CW00 308 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 VEGFAP15692 232 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-218ENST00000556343 PLCD1P51178 756 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 EXOSC10Q01780 885 aaKnown RBP10.85□□□□□ -0.67
ACTN1-218ENST00000556343 RASA3Q14644 834 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 SUPT20HL1Q3ZLR7 823 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 ANGEL2Q5VTE6 544 aaKnown RBP10.85□□□□□ -0.67
ACTN1-218ENST00000556343 DCAF15Q66K64 600 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 Q6ZUG5 572 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 SULF1Q8IWU6 871 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 STK11IPQ8N1F8 1099 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 DEFB129Q9H1M3 183 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 CABP5Q9NP86 173 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 LIMCH1Q9UPQ0 1083 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.85□□□□□ -0.67
ACTN1-218ENST00000556343 ROBO3Q96MS0 1386 aa10.85□□□□□ -0.67
ACTN1-218ENST00000556343 DICER1Q9UPY3 1922 aaKnown RBP10.85□□□□□ -0.67
ACTN1-218ENST00000556343 COL2A1P02458 1487 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-218ENST00000556343 DDTLA6NHG4 134 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-218ENST00000556343 TBC1D12O60347 775 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 HSP90AA1P07900 732 aaKnown RBP10.84□□□□□ -0.67
ACTN1-218ENST00000556343 TFAP4Q01664 338 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 TMEM67Q5HYA8 995 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 NFXL1Q6ZNB6 911 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 MB21D2Q8IYB1 491 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-218ENST00000556343 FBXL16Q8N461 479 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 TRPM4Q8TD43 1214 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 DYNLL2Q96FJ2 89 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 TAF1DQ9H5J8 278 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-218ENST00000556343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.84□□□□□ -0.67
ACTN1-218ENST00000556343 SH2B1Q9NRF2 756 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-218ENST00000556343 TCP11L1Q9NUJ3 509 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 ZSWIM5Q9P217 1185 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 ATRNL1Q5VV63 1379 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 SBF1O95248 1867 aa10.84□□□□□ -0.67
ACTN1-218ENST00000556343 CCDC69A6NI79 296 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 K7ELQ4 463 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-218ENST00000556343 NF2P35240 595 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 AK2P54819 239 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 GABPAQ06546 454 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 WTAPQ15007 396 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 CERKLQ49MI3 558 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-218ENST00000556343 EAPPQ56P03 285 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-218ENST00000556343 METTL16Q86W50 562 aaKnown RBP10.83□□□□□ -0.68
ACTN1-218ENST00000556343 ZFPM1Q8IX07 1006 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 TTC14Q96N46 770 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 IPO9Q96P70 1041 aaKnown RBP10.83□□□□□ -0.68
ACTN1-218ENST00000556343 ZSCAN10Q96SZ4 725 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-218ENST00000556343 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 GINM1Q9NU53 330 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 GGA3Q9NZ52 723 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 ANGEL1Q9UNK9 670 aaKnown RBP10.83□□□□□ -0.68
ACTN1-218ENST00000556343 NEDD4P46934 1319 aa10.83□□□□□ -0.68
ACTN1-218ENST00000556343 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
ACTN1-218ENST00000556343 PRDM1O75626 825 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 EGFRP00533 1210 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 RASA1P20936 1047 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 LIFRP42702 1097 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 HIRAP54198 1017 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-218ENST00000556343 IFIT1BQ5T764 474 aaKnown RBP10.82□□□□□ -0.68
ACTN1-218ENST00000556343 CDC37L1Q7L3B6 337 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 SH3BP5LQ7L8J4 393 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 DGKHQ86XP1 1220 aa10.82□□□□□ -0.68
ACTN1-218ENST00000556343 NEDD1Q8NHV4 660 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms