RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SNCAIPQ9Y6H5 919 aa14.02□□□□□ -0.17
SLIRP-205ENST00000556310 ATAD5Q96QE3 1844 aa14.01□□□□□ -0.17
SLIRP-205ENST00000556310 DDTLA6NHG4 134 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-205ENST00000556310 SPDYE5A6NIY4 337 aa14.01□□□□□ -0.17
SLIRP-205ENST00000556310 GOLIM4O00461 696 aa14.01□□□□□ -0.17
SLIRP-205ENST00000556310 TRPA1O75762 1119 aa14.01□□□□□ -0.17
SLIRP-205ENST00000556310 INHBEP58166 350 aa14.01□□□□□ -0.17
SLIRP-205ENST00000556310 HAUS7Q99871 368 aa14.01□□□□□ -0.17
SLIRP-205ENST00000556310 PAG1Q9NWQ8 432 aa14.01□□□□□ -0.17
SLIRP-205ENST00000556310 FLT1P17948 1338 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 PDE6AP16499 860 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 INPP5BP32019 993 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 MAP3K10Q02779 954 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 HDAC1Q13547 482 aaPredicted RBP14□□□□□ -0.17
SLIRP-205ENST00000556310 NOL9Q5SY16 702 aaKnown RBP14□□□□□ -0.17
SLIRP-205ENST00000556310 ERO1BQ86YB8 467 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 IFNL1Q8IU54 200 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 ZKSCAN4Q969J2 545 aaPredicted RBP14□□□□□ -0.17
SLIRP-205ENST00000556310 OTUD5Q96G74 571 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 GPATCH3Q96I76 525 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 BOLA2Q9H3K6 86 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 ECHDC1Q9NTX5 307 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 STK24Q9Y6E0 443 aa14□□□□□ -0.17
SLIRP-205ENST00000556310 PHIPQ8WWQ0 1821 aa13.99□□□□□ -0.17
SLIRP-205ENST00000556310 PDAP1Q13442 181 aaKnown RBP13.99□□□□□ -0.17
SLIRP-205ENST00000556310 MIGA1Q8NAN2 632 aa13.99□□□□□ -0.17
SLIRP-205ENST00000556310 EDC3Q96F86 508 aaKnown RBP13.99□□□□□ -0.17
SLIRP-205ENST00000556310 CFHR5Q9BXR6 569 aa13.99□□□□□ -0.17
SLIRP-205ENST00000556310 PTPRFP10586 1907 aa13.99□□□□□ -0.17
SLIRP-205ENST00000556310 TESPA1A2RU30 521 aaPredicted RBP13.98□□□□□ -0.17
SLIRP-205ENST00000556310 PHF20L1A8MW92 1017 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 TBC1D12O60347 775 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 ALDH1A1P00352 501 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 GTF2A2P52657 109 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
SLIRP-205ENST00000556310 PPIL2Q13356 520 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 SLC9C2Q5TAH2 1124 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 MAPKAPK5Q8IW41 473 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 TNS4Q8IZW8 715 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 TGFBRAP1Q8WUH2 860 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 GCC1Q96CN9 775 aa13.98□□□□□ -0.17
SLIRP-205ENST00000556310 RIOK1Q9BRS2 568 aaKnown RBP13.98□□□□□ -0.17
SLIRP-205ENST00000556310 DHX36Q9H2U1 1008 aaKnown RBP13.98□□□□□ -0.17
SLIRP-205ENST00000556310 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
SLIRP-205ENST00000556310 ZNF532Q9HCE3 1301 aa13.97□□□□□ -0.17
SLIRP-205ENST00000556310 TCRBV5S4A2TA0A5A2 114 aa13.97□□□□□ -0.17
SLIRP-205ENST00000556310 IGF2BP3O00425 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
SLIRP-205ENST00000556310 PPATQ06203 517 aa13.97□□□□□ -0.17
SLIRP-205ENST00000556310 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
SLIRP-205ENST00000556310 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
SLIRP-205ENST00000556310 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.97□□□□□ -0.17
SLIRP-205ENST00000556310 HERC5Q9UII4 1024 aaKnown RBP13.97□□□□□ -0.17
SLIRP-205ENST00000556310 TTC41PQ6P2S7 1318 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 CCL15-CCL14A0A0B4J2E2 113 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 MAGEB6P1A0A0J9YX57 407 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 ADD2P35612 726 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 CCL15Q16663 113 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
SLIRP-205ENST00000556310 OTUD7BQ6GQQ9 843 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 SCYL3Q8IZE3 742 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 BRI3BPQ8WY22 251 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.96□□□□□ -0.17
SLIRP-205ENST00000556310 PI4KBQ9UBF8 816 aa13.96□□□□□ -0.17
SLIRP-205ENST00000556310 FAM196BA6NMK8 535 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 IRF6O14896 467 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
SLIRP-205ENST00000556310 TBC1D8O95759 1140 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 SLURP2P0DP57 97 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 CETPP11597 493 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 USP5P45974 858 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 PSEN1P49768 467 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 SNAPC2Q13487 334 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 TSHZ3Q63HK5 1081 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 POTEHQ6S545 545 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 PTPN18Q99952 460 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 PICK1Q9NRD5 415 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 KCNH4Q9UQ05 1017 aa13.95□□□□□ -0.18
SLIRP-205ENST00000556310 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 ERC2O15083 957 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 HLA-DOAP06340 250 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 MX1P20591 662 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 UBE3CQ15386 1083 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 METTL16Q86W50 562 aaKnown RBP13.94□□□□□ -0.18
SLIRP-205ENST00000556310 OTUD7AQ8TE49 926 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-205ENST00000556310 CRNKL1Q9BZJ0 848 aaKnown RBP13.94□□□□□ -0.18
SLIRP-205ENST00000556310 RWDD1Q9H446 243 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-205ENST00000556310 SAP30BPQ9UHR5 308 aaKnown RBP13.94□□□□□ -0.18
SLIRP-205ENST00000556310 PALD1Q9ULE6 856 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 MYH8P13535 1937 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 BAZ2AQ9UIF9 1905 aaKnown RBP13.94□□□□□ -0.18
SLIRP-205ENST00000556310 LOC285556D6RIA3 1793 aa13.94□□□□□ -0.18
SLIRP-205ENST00000556310 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
SLIRP-205ENST00000556310 PTPRAP18433 802 aa13.93□□□□□ -0.18
SLIRP-205ENST00000556310 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
SLIRP-205ENST00000556310 SMC5Q8IY18 1101 aa13.93□□□□□ -0.18
SLIRP-205ENST00000556310 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
SLIRP-205ENST00000556310 KBTBD3Q8NAB2 608 aa13.93□□□□□ -0.18
SLIRP-205ENST00000556310 PI4K2BQ8TCG2 481 aa13.93□□□□□ -0.18
SLIRP-205ENST00000556310 DNAJC18Q9H819 358 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms