RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 SPATA31A1Q5TZJ5 1347 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 SBF2Q86WG5 1849 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 PHF20L1A8MW92 1017 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 EXOC5O00471 708 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 CPB1P15086 417 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 BAG6P46379 1132 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 GPLD1P80108 840 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 OR13H1Q8NG92 308 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 IP6K1Q92551 441 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 NSUN5Q96P11 429 aaKnown RBP6.28□□□□□ -1.4
ATXN3-237ENST00000556274 CNTN3Q9P232 1028 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 DCTN4Q9UJW0 460 aa6.28□□□□□ -1.4
ATXN3-237ENST00000556274 MAP3K19Q56UN5 1328 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 VIRMAQ69YN4 1812 aaKnown RBP6.27□□□□□ -1.41
ATXN3-237ENST00000556274 WNK3Q9BYP7 1800 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 RGS12O14924 1447 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 SLIT3O75094 1523 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 LOC102724428A0A0B4J2F2 783 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 J3QW42 95 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 TNFRSF21O75509 655 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 CYP2E1P05181 493 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-237ENST00000556274 CES1P23141 567 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 SOX18P35713 384 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 SIK1P57059 783 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 HYAL2Q12891 473 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
ATXN3-237ENST00000556274 DDB1Q16531 1140 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 SND1Q7KZF4 910 aaKnown RBP eCLIP6.27□□□□□ -1.41
ATXN3-237ENST00000556274 USHBP1Q8N6Y0 703 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 C1orf127Q8N9H9 656 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 DDX54Q8TDD1 881 aaKnown RBP6.27□□□□□ -1.41
ATXN3-237ENST00000556274 STARD13Q9Y3M8 1113 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 CPDO75976 1380 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 AATKQ6ZMQ8 1374 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 USP31Q70CQ4 1352 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 CCDC7Q96M83 1385 aa6.27□□□□□ -1.41
ATXN3-237ENST00000556274 USP54Q70EL1 1684 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 LMO7Q8WWI1 1683 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 WASHC2AQ641Q2 1341 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 WDR17Q8IZU2 1322 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 M0R082 166 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 PHACTR2O75167 634 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 GHRHP01286 108 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 EIF2AK2P19525 551 aaKnown RBP6.26□□□□□ -1.41
ATXN3-237ENST00000556274 HOXC9P31274 260 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 SNRPNP63162 240 aaKnown RBP6.26□□□□□ -1.41
ATXN3-237ENST00000556274 HSP90AB2PQ58FF8 381 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 PSAPL1Q6NUJ1 521 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 PODNQ7Z5L7 613 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 MICALL1Q8N3F8 863 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 ZNF417Q8TAU3 575 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 NUDT8Q8WV74 236 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 PMEPA1Q969W9 287 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 SPACA7Q96KW9 195 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 ZNF587Q96SQ5 575 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-237ENST00000556274 FAM129BQ96TA1 746 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 CARD10Q9BWT7 1032 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 RBCK1Q9BYM8 510 aa6.26□□□□□ -1.41
ATXN3-237ENST00000556274 FOXD3Q9UJU5 478 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-237ENST00000556274 CRB1P82279 1406 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 NFAT5O94916 1531 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 RGS9O75916 674 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-237ENST00000556274 TRIM37O94972 964 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 ALBP02768 609 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 NEFLP07196 543 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 FURINP09958 794 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 HOXD8P13378 290 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-237ENST00000556274 COL13A1Q5TAT6 717 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-237ENST00000556274 ELMSAN1Q6PJG2 1045 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 C8orf86Q6ZUL3 223 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 TMC7Q7Z402 723 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 NCAPG2Q86XI2 1143 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 BEND7Q8N7W2 519 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-237ENST00000556274 SNX29Q8TEQ0 813 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 DMRTB1Q96MA1 342 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 NIF3L1Q9GZT8 377 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 RBSNQ9H1K0 784 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 KANSL3Q9P2N6 904 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 NAGPAQ9UK23 515 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 THRAP3Q9Y2W1 955 aaKnown RBP6.25□□□□□ -1.41
ATXN3-237ENST00000556274 COL5A2P05997 1499 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-237ENST00000556274 FAM208AQ9UK61 1670 aaKnown RBP6.25□□□□□ -1.41
ATXN3-237ENST00000556274 PEAK1Q9H792 1746 aa6.25□□□□□ -1.41
ATXN3-237ENST00000556274 CDK12Q9NYV4 1490 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-237ENST00000556274 EREGO14944 169 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 LILRB5O75023 590 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 APBA3O96018 575 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 IL2RBP14784 551 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 DGKGP49619 791 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 PERM1Q5SV97 790 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 NBPF6Q5VWK0 638 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 C20orf204Q6ZNR8 217 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 FAM196AQ6ZSG2 479 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 ZSCAN29Q8IWY8 852 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-237ENST00000556274 RAPGEF4Q8WZA2 1011 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-237ENST00000556274 ACSBG1Q96GR2 724 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 NBPF4Q96M43 638 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 SMG9Q9H0W8 520 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms