RNA–Protein interactions for RNA: ENST00000556240.1

GPHN-212, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-212ENST00000556240 GIPC2Q8TF65 315 aa6.34□□□□□ -1.39
GPHN-212ENST00000556240 CRELD1Q96HD1 420 aa6.34□□□□□ -1.39
GPHN-212ENST00000556240 PCDHGC5Q9Y5F6 944 aa6.34□□□□□ -1.39
GPHN-212ENST00000556240 CD8BP10966 210 aa6.33□□□□□ -1.4
GPHN-212ENST00000556240 HCLS1P14317 486 aaPredicted RBP6.33□□□□□ -1.4
GPHN-212ENST00000556240 FUT4P22083 530 aa6.33□□□□□ -1.4
GPHN-212ENST00000556240 ST13P50502 369 aaKnown RBP6.33□□□□□ -1.4
GPHN-212ENST00000556240 MFAP1P55081 439 aaKnown RBP6.33□□□□□ -1.4
GPHN-212ENST00000556240 TAF1CQ15572 869 aaPredicted RBP6.33□□□□□ -1.4
GPHN-212ENST00000556240 TTBK2Q6IQ55 1244 aa6.33□□□□□ -1.4
GPHN-212ENST00000556240 PDZD3Q86UT5 571 aa6.33□□□□□ -1.4
GPHN-212ENST00000556240 U3KQE9 123 aa6.33□□□□□ -1.4
GPHN-212ENST00000556240 LEFTY1O75610 366 aa6.32□□□□□ -1.4
GPHN-212ENST00000556240 CD96P40200 585 aa6.32□□□□□ -1.4
GPHN-212ENST00000556240 RPS26P62854 115 aaKnown RBP6.32□□□□□ -1.4
GPHN-212ENST00000556240 ZNF252P-AS1Q0IIN9 211 aa6.32□□□□□ -1.4
GPHN-212ENST00000556240 ARHGAP27Q6ZUM4 889 aa6.32□□□□□ -1.4
GPHN-212ENST00000556240 GPBAR1Q8TDU6 330 aa6.32□□□□□ -1.4
GPHN-212ENST00000556240 ELMO3Q96BJ8 720 aa6.32□□□□□ -1.4
GPHN-212ENST00000556240 RC3H2Q9HBD1 1191 aaKnown RBP6.32□□□□□ -1.4
GPHN-212ENST00000556240 CELA3AP09093 270 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 BMP6P22004 513 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 PRKCQQ04759 706 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 PWP1Q13610 501 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 IFI16Q16666 785 aaKnown RBP6.31□□□□□ -1.4
GPHN-212ENST00000556240 ZNF648Q5T619 568 aaPredicted RBP6.31□□□□□ -1.4
GPHN-212ENST00000556240 HDXQ7Z353 690 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 NOC4LQ9BVI4 516 aaKnown RBP6.31□□□□□ -1.4
GPHN-212ENST00000556240 DUSP23Q9BVJ7 150 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 VAV3Q9UKW4 847 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 PCOLCE2Q9UKZ9 415 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 PCDHA4Q9UN74 947 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
GPHN-212ENST00000556240 CARMIL2Q6F5E8 1435 aa6.31□□□□□ -1.4
GPHN-212ENST00000556240 PAGE1O75459 146 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 CEACAM5P06731 702 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 NEFMP07197 916 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 RNASE1P07998 156 aaKnown RBP6.3□□□□□ -1.4
GPHN-212ENST00000556240 ERVK-24P63145 666 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 CDC37L1Q7L3B6 337 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 ATG4DQ86TL0 474 aaPredicted RBP6.3□□□□□ -1.4
GPHN-212ENST00000556240 TOP6BLQ8N6T0 577 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 KCT2Q8NC54 265 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 STK35Q8TDR2 534 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 HRASLS5Q96KN8 279 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 FAM161BQ96MY7 647 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 MBNL3Q9NUK0 354 aaKnown RBP6.3□□□□□ -1.4
GPHN-212ENST00000556240 ADAMTS6Q9UKP5 1117 aa6.3□□□□□ -1.4
GPHN-212ENST00000556240 ITIH2P19823 946 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 OXCT1P55809 520 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 MAP3K11Q16584 847 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 AOC3Q16853 763 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.29□□□□□ -1.4
GPHN-212ENST00000556240 RNF214Q8ND24 703 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 PI4K2BQ8TCG2 481 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 FAM168AQ92567 244 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 ISL2Q96A47 359 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 MIR1-1HGQ9H1L0 117 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 MKNK2Q9HBH9 465 aa6.29□□□□□ -1.4
GPHN-212ENST00000556240 TMEM265A0A087WTH1 108 aa6.28□□□□□ -1.4
GPHN-212ENST00000556240 LIG3P49916 1009 aa6.28□□□□□ -1.4
GPHN-212ENST00000556240 ZC3H12AQ5D1E8 599 aaKnown RBP6.28□□□□□ -1.4
GPHN-212ENST00000556240 MEI1Q5TIA1 1274 aa6.28□□□□□ -1.4
GPHN-212ENST00000556240 RELL1Q8IUW5 271 aa6.28□□□□□ -1.4
GPHN-212ENST00000556240 LRRN4CLQ8ND94 238 aa6.28□□□□□ -1.4
GPHN-212ENST00000556240 GRIN3AQ8TCU5 1115 aa6.28□□□□□ -1.4
GPHN-212ENST00000556240 PLAGL2Q9UPG8 496 aa6.28□□□□□ -1.4
GPHN-212ENST00000556240 USP31Q70CQ4 1352 aa6.28□□□□□ -1.4
GPHN-212ENST00000556240 FANCGO15287 622 aa6.27□□□□□ -1.41
GPHN-212ENST00000556240 ZNF124Q15973 351 aa6.27□□□□□ -1.41
GPHN-212ENST00000556240 ANGEL2Q5VTE6 544 aaKnown RBP6.27□□□□□ -1.41
GPHN-212ENST00000556240 AGMOQ6ZNB7 445 aa6.27□□□□□ -1.41
GPHN-212ENST00000556240 RNF19AQ9NV58 838 aa6.27□□□□□ -1.41
GPHN-212ENST00000556240 SNCAIPQ9Y6H5 919 aa6.27□□□□□ -1.41
GPHN-212ENST00000556240 ARID1BQ8NFD5 2236 aaPredicted RBP6.27□□□□□ -1.41
GPHN-212ENST00000556240 DCDC2CA8MYV0 355 aa6.26□□□□□ -1.41
GPHN-212ENST00000556240 BPNT1O95861 308 aa6.26□□□□□ -1.41
GPHN-212ENST00000556240 TRIM26Q12899 539 aaPredicted RBP6.26□□□□□ -1.41
GPHN-212ENST00000556240 TSNAXIP1Q2TAA8 658 aa6.26□□□□□ -1.41
GPHN-212ENST00000556240 CACNA2D2Q9NY47 1150 aa6.26□□□□□ -1.41
GPHN-212ENST00000556240 CCDC9Q9Y3X0 531 aaKnown RBP6.26□□□□□ -1.41
GPHN-212ENST00000556240 FARP2O94887 1054 aaPredicted RBP6.25□□□□□ -1.41
GPHN-212ENST00000556240 ETF1P62495 437 aaKnown RBP6.25□□□□□ -1.41
GPHN-212ENST00000556240 TAGLNQ01995 201 aaKnown RBP6.25□□□□□ -1.41
GPHN-212ENST00000556240 C12orf40Q86WS4 652 aa6.25□□□□□ -1.41
GPHN-212ENST00000556240 ZNF507Q8TCN5 953 aa6.25□□□□□ -1.41
GPHN-212ENST00000556240 HEXIM2Q96MH2 286 aaKnown RBP6.25□□□□□ -1.41
GPHN-212ENST00000556240 CSADQ9Y600 493 aa6.25□□□□□ -1.41
GPHN-212ENST00000556240 PRAMEF27A3QJZ7 478 aa6.24□□□□□ -1.41
GPHN-212ENST00000556240 ZNF16P17020 682 aaPredicted RBP6.24□□□□□ -1.41
GPHN-212ENST00000556240 GBP2P32456 591 aaPredicted RBP6.24□□□□□ -1.41
GPHN-212ENST00000556240 PPM1JQ5JR12 505 aa6.24□□□□□ -1.41
GPHN-212ENST00000556240 WIPI1Q5MNZ9 446 aaPredicted RBP6.24□□□□□ -1.41
GPHN-212ENST00000556240 SLC23A3Q6PIS1 610 aa6.24□□□□□ -1.41
GPHN-212ENST00000556240 CCDC84Q86UT8 332 aaPredicted RBP6.24□□□□□ -1.41
GPHN-212ENST00000556240 TMEM40Q8WWA1 233 aa6.24□□□□□ -1.41
GPHN-212ENST00000556240 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
GPHN-212ENST00000556240 TNKS2Q9H2K2 1166 aa6.24□□□□□ -1.41
GPHN-212ENST00000556240 PRDM7Q9NQW5 492 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms