RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 CRISPLD1Q9H336 500 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 SUV39H2Q9H5I1 410 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 CWC25Q9NXE8 425 aaPredicted RBP7.86□□□□□ -1.15
HIF1A-208ENST00000556237 TFIP11Q9UBB9 837 aaKnown RBP7.86□□□□□ -1.15
HIF1A-208ENST00000556237 CCNL1Q9UK58 526 aaPredicted RBP7.86□□□□□ -1.15
HIF1A-208ENST00000556237 PXDNLA1KZ92 1463 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 DOT1LQ8TEK3 1739 aa7.86□□□□□ -1.15
HIF1A-208ENST00000556237 PAPPAQ13219 1627 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 UTYO14607 1347 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 UBR2Q8IWV8 1755 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 PALM3A6NDB9 673 aaPredicted RBP7.85□□□□□ -1.15
HIF1A-208ENST00000556237 SRGAP3O43295 1099 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 BNIP3LO60238 219 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 CTBSQ01459 385 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 TRIM28Q13263 835 aaKnown RBP7.85□□□□□ -1.15
HIF1A-208ENST00000556237 OXLD1Q5BKU9 147 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 FIGNL1Q6PIW4 674 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 UBE3BQ7Z3V4 1068 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 CHD1LQ86WJ1 897 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 Q8N3U1 123 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 LINC00116Q8NCU8 138 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 PPP1R12CQ9BZL4 782 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 LNPKQ9C0E8 428 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 THSD7AQ9UPZ6 1657 aa7.85□□□□□ -1.15
HIF1A-208ENST00000556237 USP17L5A8MUK1 530 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 ATP9BO43861 1147 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 RPS6KA4O75676 772 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 SURF6O75683 361 aaKnown RBP7.84□□□□□ -1.15
HIF1A-208ENST00000556237 ARAFP10398 606 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 EPXP11678 715 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 GPTP24298 496 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 NCOA4Q13772 614 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 TLR1Q15399 786 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 SSH3Q8TE77 659 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 KAZALD1Q96I82 304 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 BTBD6Q96KE9 485 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 ETNK1Q9HBU6 452 aa7.84□□□□□ -1.15
HIF1A-208ENST00000556237 NOP53Q9NZM5 478 aaKnown RBP7.84□□□□□ -1.15
HIF1A-208ENST00000556237 SMARCA5O60264 1052 aaPredicted RBP7.83□□□□□ -1.16
HIF1A-208ENST00000556237 RAB11FIP3O75154 756 aa7.83□□□□□ -1.16
HIF1A-208ENST00000556237 STAU1O95793 577 aaKnown RBP7.83□□□□□ -1.16
HIF1A-208ENST00000556237 APBA3O96018 575 aa7.83□□□□□ -1.16
HIF1A-208ENST00000556237 CASP7P55210 303 aa7.83□□□□□ -1.16
HIF1A-208ENST00000556237 USP4Q13107 963 aa7.83□□□□□ -1.16
HIF1A-208ENST00000556237 EPHA10Q5JZY3 1008 aa7.83□□□□□ -1.16
HIF1A-208ENST00000556237 SMIM5Q71RC9 77 aa7.83□□□□□ -1.16
HIF1A-208ENST00000556237 NLRP10Q86W26 655 aa7.83□□□□□ -1.16
HIF1A-208ENST00000556237 C16orf71Q8IYS4 520 aaPredicted RBP7.83□□□□□ -1.16
HIF1A-208ENST00000556237 BICC1Q9H694 974 aaKnown RBP7.83□□□□□ -1.16
HIF1A-208ENST00000556237 EXOC6BQ9Y2D4 811 aa7.83□□□□□ -1.16
HIF1A-208ENST00000556237 RTCBQ9Y3I0 505 aaKnown RBP7.83□□□□□ -1.16
HIF1A-208ENST00000556237 MAFBQ9Y5Q3 323 aaPredicted RBP7.83□□□□□ -1.16
HIF1A-208ENST00000556237 CNTNAP4Q9C0A0 1308 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 LAMB4A4D0S4 1761 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 USP17L3A6NCW0 530 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 USP17L4A6NCW7 530 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 C1QTNF9BB2RNN3 333 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 CAMTA2O94983 1202 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 PCCAP05165 728 aaPredicted RBP7.82□□□□□ -1.16
HIF1A-208ENST00000556237 HMGB2P26583 209 aaKnown RBP7.82□□□□□ -1.16
HIF1A-208ENST00000556237 PLA2G4AP47712 749 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 DGKGP49619 791 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 G3BP1Q13283 466 aaKnown RBP eCLIP7.82□□□□□ -1.169e-11■■□□□ 11.7
HIF1A-208ENST00000556237 OS9Q13438 667 aaPredicted RBP7.82□□□□□ -1.16
HIF1A-208ENST00000556237 MTX1Q13505 466 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 HSP90AB4PQ58FF6 505 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 TRAPPC3LQ5T215 181 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 USP17L2Q6R6M4 530 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 LMBR1LQ6UX01 489 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 USP17L1Q7RTZ2 530 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 PLEKHM2Q8IWE5 1019 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 ZNF34Q8IZ26 560 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 ZBTB38Q8NAP3 1195 aaPredicted RBP7.82□□□□□ -1.16
HIF1A-208ENST00000556237 C1orf216Q8TAB5 229 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 FAM89AQ96GI7 184 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 CHMP3Q9Y3E7 222 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 PCDHGC4Q9Y5F7 938 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 PCDHGA11Q9Y5H2 935 aa7.82□□□□□ -1.16
HIF1A-208ENST00000556237 IBTKQ9P2D0 1353 aaPredicted RBP7.82□□□□□ -1.16
HIF1A-208ENST00000556237 FAM177BA6PVY3 158 aa7.81□□□□□ -1.16
HIF1A-208ENST00000556237 FOXO4P98177 505 aa7.81□□□□□ -1.16
HIF1A-208ENST00000556237 SUSD4Q5VX71 490 aa7.81□□□□□ -1.16
HIF1A-208ENST00000556237 CLEC4GQ6UXB4 293 aa7.81□□□□□ -1.16
HIF1A-208ENST00000556237 ERICH6Q7L0X2 663 aa7.81□□□□□ -1.16
HIF1A-208ENST00000556237 CD163Q86VB7 1156 aa7.81□□□□□ -1.16
HIF1A-208ENST00000556237 LRRCC1Q9C099 1032 aa7.81□□□□□ -1.16
HIF1A-208ENST00000556237 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
HIF1A-208ENST00000556237 TRMT112Q9UI30 125 aaKnown RBP7.81□□□□□ -1.16
HIF1A-208ENST00000556237 PA2G4Q9UQ80 394 aaKnown RBP7.81□□□□□ -1.16
HIF1A-208ENST00000556237 ZNF652Q9Y2D9 606 aa7.81□□□□□ -1.16
HIF1A-208ENST00000556237 NOP58Q9Y2X3 529 aaKnown RBP7.81□□□□□ -1.16
HIF1A-208ENST00000556237 PLSCR1O15162 318 aa7.8□□□□□ -1.16
HIF1A-208ENST00000556237 LZTS3O60299 673 aaPredicted RBP7.8□□□□□ -1.16
HIF1A-208ENST00000556237 RFC4P35249 363 aa7.8□□□□□ -1.16
HIF1A-208ENST00000556237 TXNRD1Q16881 649 aa7.8□□□□□ -1.16
HIF1A-208ENST00000556237 EML3Q32P44 896 aa7.8□□□□□ -1.16
HIF1A-208ENST00000556237 RABL6Q3YEC7 729 aaPredicted RBP7.8□□□□□ -1.16
HIF1A-208ENST00000556237 PARP10Q53GL7 1025 aa7.8□□□□□ -1.16
HIF1A-208ENST00000556237 USPL1Q5W0Q7 1092 aa7.8□□□□□ -1.16
HIF1A-208ENST00000556237 BICDL1Q6ZP65 573 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms