RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 HSP90AA4PQ58FG1 418 aa8.84□□□□□ -1
CHD8-209ENST00000555935 WWC3Q9ULE0 1092 aa8.84□□□□□ -1
CHD8-209ENST00000555935 TARSL2A2RTX5 802 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 PHACTR2O75167 634 aa8.83□□□□□ -1
CHD8-209ENST00000555935 SYF2O95926 243 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 IFIT1P09914 478 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 MMP14P50281 582 aa8.83□□□□□ -1
CHD8-209ENST00000555935 ANTXR2P58335 489 aa8.83□□□□□ -1
CHD8-209ENST00000555935 AMPD2Q01433 879 aa8.83□□□□□ -1
CHD8-209ENST00000555935 SPATA1Q5VX52 437 aa8.83□□□□□ -1
CHD8-209ENST00000555935 ANKRD13DQ6ZTN6 518 aa8.83□□□□□ -1
CHD8-209ENST00000555935 APTXQ7Z2E3 356 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 UBE3BQ7Z3V4 1068 aa8.83□□□□□ -1
CHD8-209ENST00000555935 ZNF579Q8NAF0 562 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 SMARCC1Q92922 1105 aaPredicted RBP8.83□□□□□ -1
CHD8-209ENST00000555935 RPGRIP1Q96KN7 1286 aa8.83□□□□□ -1
CHD8-209ENST00000555935 NEUROD6Q96NK8 337 aa8.83□□□□□ -1
CHD8-209ENST00000555935 SAMSN1Q9NSI8 373 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 MYO6Q9UM54 1294 aa8.83□□□□□ -1
CHD8-209ENST00000555935 PXDNQ92626 1479 aa8.83□□□□□ -1
CHD8-209ENST00000555935 SLIT3O75094 1523 aa8.83□□□□□ -1
CHD8-209ENST00000555935 NFAT5O94916 1531 aa8.83□□□□□ -1
CHD8-209ENST00000555935 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -1
CHD8-209ENST00000555935 USP14P54578 494 aa8.83□□□□□ -1
CHD8-209ENST00000555935 SF3B2Q13435 895 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 COPS6Q7L5N1 327 aa8.83□□□□□ -1
CHD8-209ENST00000555935 TRMT44Q8IYL2 757 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 SPATA20Q8TB22 786 aa8.83□□□□□ -1
CHD8-209ENST00000555935 OSBP2Q969R2 916 aa8.83□□□□□ -1
CHD8-209ENST00000555935 ADD3Q9UEY8 706 aaKnown RBP8.83□□□□□ -1
CHD8-209ENST00000555935 HPCAL4Q9UM19 191 aa8.83□□□□□ -1
CHD8-209ENST00000555935 TBX22Q9Y458 520 aa8.83□□□□□ -1
CHD8-209ENST00000555935 FOXN1O15353 648 aa8.82□□□□□ -1
CHD8-209ENST00000555935 ERLIN2O94905 339 aa8.82□□□□□ -1
CHD8-209ENST00000555935 PTPREP23469 700 aa8.82□□□□□ -1
CHD8-209ENST00000555935 LTKP29376 864 aa8.82□□□□□ -1
CHD8-209ENST00000555935 IL15P40933 162 aaPredicted RBP8.82□□□□□ -1
CHD8-209ENST00000555935 TRIM14Q14142 442 aa8.82□□□□□ -1
CHD8-209ENST00000555935 SLC9C2Q5TAH2 1124 aa8.82□□□□□ -1
CHD8-209ENST00000555935 NOA1Q8NC60 698 aaKnown RBP8.82□□□□□ -1
CHD8-209ENST00000555935 KCNH5Q8NCM2 988 aa8.82□□□□□ -1
CHD8-209ENST00000555935 CDC5LQ99459 802 aaKnown RBP8.82□□□□□ -1
CHD8-209ENST00000555935 ANGEL1Q9UNK9 670 aaKnown RBP8.82□□□□□ -1
CHD8-209ENST00000555935 LTN1O94822 1766 aa8.82□□□□□ -1
CHD8-209ENST00000555935 CDHR2Q9BYE9 1310 aa8.82□□□□□ -1
CHD8-209ENST00000555935 C4AP0C0L4 1744 aa8.82□□□□□ -1
CHD8-209ENST00000555935 C4BP0C0L5 1744 aa8.82□□□□□ -1
CHD8-209ENST00000555935 DDX60Q8IY21 1712 aaKnown RBP8.82□□□□□ -1
CHD8-209ENST00000555935 LOC102724159A0A0B4J2E5 919 aa8.82□□□□□ -1
CHD8-209ENST00000555935 TEX33O43247 280 aa8.82□□□□□ -1
CHD8-209ENST00000555935 FGAP02671 866 aa8.82□□□□□ -1
CHD8-209ENST00000555935 GSCP56915 257 aaPredicted RBP8.82□□□□□ -1
CHD8-209ENST00000555935 STIM1Q13586 685 aa8.82□□□□□ -1
CHD8-209ENST00000555935 PWP2Q15269 919 aaKnown RBP8.82□□□□□ -1
CHD8-209ENST00000555935 CDKAL1Q5VV42 579 aa8.82□□□□□ -1
CHD8-209ENST00000555935 CYP26C1Q6V0L0 522 aa8.82□□□□□ -1
CHD8-209ENST00000555935 ATG9AQ7Z3C6 839 aa8.82□□□□□ -1
CHD8-209ENST00000555935 POTEDQ86YR6 584 aa8.82□□□□□ -1
CHD8-209ENST00000555935 MICALL1Q8N3F8 863 aa8.82□□□□□ -1
CHD8-209ENST00000555935 COG1Q8WTW3 980 aa8.82□□□□□ -1
CHD8-209ENST00000555935 MED15Q96RN5 788 aa8.82□□□□□ -1
CHD8-209ENST00000555935 TOMM22Q9NS69 142 aa8.82□□□□□ -1
CHD8-209ENST00000555935 STK36Q9NRP7 1315 aa8.81□□□□□ -1
CHD8-209ENST00000555935 PHRF1Q9P1Y6 1649 aaKnown RBP8.81□□□□□ -1
CHD8-209ENST00000555935 RGPD8O14715 1765 aaPredicted RBP8.81□□□□□ -1
CHD8-209ENST00000555935 EBAG9O00559 213 aa8.81□□□□□ -1
CHD8-209ENST00000555935 ZNF213O14771 459 aa8.81□□□□□ -1
CHD8-209ENST00000555935 FOXP2O15409 715 aa8.81□□□□□ -1
CHD8-209ENST00000555935 MYL6BP14649 208 aa8.81□□□□□ -1
CHD8-209ENST00000555935 ARHGAP25P42331 645 aa8.81□□□□□ -1
CHD8-209ENST00000555935 CASP7P55210 303 aa8.81□□□□□ -1
CHD8-209ENST00000555935 HAND2P61296 217 aa8.81□□□□□ -1
CHD8-209ENST00000555935 CKAP4Q07065 602 aaKnown RBP8.81□□□□□ -1
CHD8-209ENST00000555935 GBP6Q6ZN66 633 aa8.81□□□□□ -1
CHD8-209ENST00000555935 RPAINQ86UA6 219 aa8.81□□□□□ -1
CHD8-209ENST00000555935 STK11IPQ8N1F8 1099 aa8.81□□□□□ -1
CHD8-209ENST00000555935 FAM76AQ8TAV0 307 aa8.81□□□□□ -1
CHD8-209ENST00000555935 WASF1Q92558 559 aa8.81□□□□□ -1
CHD8-209ENST00000555935 AIFM3Q96NN9 605 aa8.81□□□□□ -1
CHD8-209ENST00000555935 CRACR2AQ9BSW2 395 aa8.81□□□□□ -1
CHD8-209ENST00000555935 SERTAD1Q9UHV2 236 aa8.81□□□□□ -1
CHD8-209ENST00000555935 FBXO2Q9UK22 296 aaPredicted RBP8.81□□□□□ -1
CHD8-209ENST00000555935 SYNRGQ9UMZ2 1314 aa8.81□□□□□ -1
CHD8-209ENST00000555935 SIPA1L3O60292 1781 aaPredicted RBP8.81□□□□□ -1
CHD8-209ENST00000555935 A0A087WZG4 1122 aa8.81□□□□□ -1
CHD8-209ENST00000555935 A0A0U1RQJ8 604 aa8.81□□□□□ -1
CHD8-209ENST00000555935 A6NNZ2 444 aa8.81□□□□□ -1
CHD8-209ENST00000555935 POLR2DO15514 142 aaKnown RBP8.81□□□□□ -1
CHD8-209ENST00000555935 PRR29P0C7W0 189 aa8.81□□□□□ -1
CHD8-209ENST00000555935 CASP14P31944 242 aa8.81□□□□□ -1
CHD8-209ENST00000555935 IARSP41252 1262 aaKnown RBP8.81□□□□□ -1
CHD8-209ENST00000555935 ZNF827Q17R98 1081 aa8.81□□□□□ -1
CHD8-209ENST00000555935 TUBB8Q3ZCM7 444 aa8.81□□□□□ -1
CHD8-209ENST00000555935 NBPF14Q5TI25 921 aa8.81□□□□□ -1
CHD8-209ENST00000555935 ZNF790Q6PG37 636 aa8.81□□□□□ -1
CHD8-209ENST00000555935 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
CHD8-209ENST00000555935 TRAPPC11Q7Z392 1133 aa8.81□□□□□ -1
CHD8-209ENST00000555935 NOSTRINQ8IVI9 506 aa8.81□□□□□ -1
CHD8-209ENST00000555935 CPLX3Q8WVH0 158 aa8.81□□□□□ -1
CHD8-209ENST00000555935 ATRIPQ8WXE1 791 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms