RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-222	ENST00000555914	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.93	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SPATA5	Q8NB90	893 aa		10.93	□□□□□ -0.66
HNRNPC-222	ENST00000555914	TRIM47	Q96LD4	638 aa		10.93	□□□□□ -0.66
HNRNPC-222	ENST00000555914	C1orf115	Q9H7X2	142 aa		10.93	□□□□□ -0.66
HNRNPC-222	ENST00000555914	PHIP	Q8WWQ0	1821 aa		10.93	□□□□□ -0.66
HNRNPC-222	ENST00000555914	PTPRF	P10586	1907 aa		10.93	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SEC24B	O95487	1268 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	ARID4A	P29374	1257 aa	Predicted RBP	10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	PSMC4	P43686	418 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.92	□□□□□ -0.66	4e-10	■□□□□ 8.8
HNRNPC-222	ENST00000555914	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SMC5	Q8IY18	1101 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SCYL3	Q8IZE3	742 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	AFG3L2	Q9Y4W6	797 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914		A0A0G2JLL6	359 aa	Predicted RBP	10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	CXCL11	O14625	94 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	KIF22	Q14807	665 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	ARHGEF6	Q15052	776 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	MTFR1	Q15390	333 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	GORAB	Q5T7V8	394 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	NBPF11	Q86T75	865 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	TMEM106C	Q9BVX2	250 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	ZMYND15	Q9H091	742 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SNRK	Q9NRH2	765 aa		10.92	□□□□□ -0.66
HNRNPC-222	ENST00000555914	TRIM75P	A6NK02	468 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	BCR	P11274	1271 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	OSBP	P22059	807 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	POLA2	Q14181	598 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	RRP1B	Q14684	758 aa	Known RBP	10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SLC4A8	Q2Y0W8	1093 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SLF2	Q8IX21	1173 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	RAI14	Q9P0K7	980 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SRRD	Q9UH36	339 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	DOCK1	Q14185	1865 aa		10.91	□□□□□ -0.66
HNRNPC-222	ENST00000555914	CTNND1	O60716	968 aa	Known RBP	10.9	□□□□□ -0.66
HNRNPC-222	ENST00000555914	GADL1	Q6ZQY3	521 aa		10.9	□□□□□ -0.66
HNRNPC-222	ENST00000555914	SSH3	Q8TE77	659 aa		10.9	□□□□□ -0.66
HNRNPC-222	ENST00000555914	DBNDD2	Q9BQY9	259 aa		10.9	□□□□□ -0.66
HNRNPC-222	ENST00000555914	CHMP4B	Q9H444	224 aa	Known RBP	10.9	□□□□□ -0.66
HNRNPC-222	ENST00000555914	PICK1	Q9NRD5	415 aa		10.9	□□□□□ -0.66
HNRNPC-222	ENST00000555914	DOCK3	Q8IZD9	2030 aa		10.9	□□□□□ -0.66
HNRNPC-222	ENST00000555914	MGAM	O43451	1857 aa		10.9	□□□□□ -0.67
HNRNPC-222	ENST00000555914	FMNL1	O95466	1100 aa	Predicted RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	GNRH1	P01148	92 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ATP8B2	P98198	1209 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	TNNI3K	Q59H18	835 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ADGRA1	Q86SQ6	560 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	PARK7	Q99497	189 aa	Known RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ZBTB40	Q9NUA8	1239 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	TLR7	Q9NYK1	1049 aa	Known RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	LRP2BP	Q9P2M1	347 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ISY1	Q9ULR0	285 aa	Known RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	FPGT-TNNI3K	V9GXZ4	949 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	SIPA1L1	O43166	1804 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ZBTB7B	O15156	539 aa	Predicted RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	TBC1D12	O60347	775 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	CYP2E1	P05181	493 aa	Predicted RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	PRKCZ	Q05513	592 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	TREML2	Q5T2D2	321 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	FASTKD5	Q7L8L6	764 aa	Known RBP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ANTXR1	Q9H6X2	564 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	GABRQ	Q9UN88	632 aa		10.89	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ATAD5	Q96QE3	1844 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	NPM3	O75607	178 aa	Known RBP	10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	SURF6	O75683	361 aa	Known RBP	10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	TTC39A	Q5SRH9	613 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ITPRIP	Q8IWB1	547 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	TEX11	Q8IYF3	940 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	RAET1E	Q8TD07	263 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	SHISA4	Q96DD7	197 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	NDUFB9	Q9Y6M9	179 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	MYPN	Q86TC9	1320 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	CDK5RAP2	Q96SN8	1893 aa		10.88	□□□□□ -0.67
HNRNPC-222	ENST00000555914	LDHC	P07864	332 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	UQCRFS1P1	P0C7P4	283 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	PTMS	P20962	102 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	GRK4	P32298	578 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ZAP70	P43403	619 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	GSTO1	P78417	241 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	JAG1	P78504	1218 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	OS9	Q13438	667 aa	Predicted RBP	10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	EAF2	Q96CJ1	260 aa	Predicted RBP	10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	GPR108	Q9NPR9	543 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	DBNL	Q9UJU6	430 aa	Known RBP	10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	TRIOBP	Q9H2D6	2365 aa		10.87	□□□□□ -0.67
HNRNPC-222	ENST00000555914	HOXD10	P28358	340 aa		10.86	□□□□□ -0.67
HNRNPC-222	ENST00000555914	PRMT2	P55345	433 aa		10.86	□□□□□ -0.67
HNRNPC-222	ENST00000555914	SPP2	Q13103	211 aa		10.86	□□□□□ -0.67
HNRNPC-222	ENST00000555914	CCDC158	Q5M9N0	1113 aa		10.86	□□□□□ -0.67
HNRNPC-222	ENST00000555914	NAA16	Q6N069	864 aa	Predicted RBP	10.86	□□□□□ -0.67
HNRNPC-222	ENST00000555914	MAPKAPK5	Q8IW41	473 aa		10.86	□□□□□ -0.67
HNRNPC-222	ENST00000555914	ANKRD13C	Q8N6S4	541 aa		10.86	□□□□□ -0.67

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