RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 RALYLQ86SE5 291 aaKnown RBP13.07□□□□□ -0.32
TMEM260-208ENST00000555905 TBC1D10CQ8IV04 446 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 ZSCAN29Q8IWY8 852 aaPredicted RBP13.07□□□□□ -0.32
TMEM260-208ENST00000555905 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 TRPM4Q8TD43 1214 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 NEK1Q96PY6 1258 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 KIF2CQ99661 725 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 ZNF287Q9HBT7 754 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 CYP46A1Q9Y6A2 500 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 COL2A1P02458 1487 aaPredicted RBP13.07□□□□□ -0.32
TMEM260-208ENST00000555905 WDR90Q96KV7 1748 aa13.07□□□□□ -0.32
TMEM260-208ENST00000555905 EPHX2P34913 555 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 ANP32AP39687 249 aaKnown RBP13.06□□□□□ -0.32
TMEM260-208ENST00000555905 ADCK5Q3MIX3 580 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 BLOC1S2Q6QNY1 142 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
TMEM260-208ENST00000555905 FAM83AQ86UY5 434 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
TMEM260-208ENST00000555905 NCOA7Q8NI08 942 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 STAG1Q8WVM7 1258 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 FAM151AQ8WW52 585 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 KRT23Q9C075 422 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 NBPF3Q9H094 633 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 ROBO3Q96MS0 1386 aa13.06□□□□□ -0.32
TMEM260-208ENST00000555905 ST18O60284 1047 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 PLCD1P51178 756 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 NEK4P51957 841 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 STOX1Q6ZVD7 989 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 RUFY3Q7L099 469 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 ZFPM1Q8IX07 1006 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 STK11IPQ8N1F8 1099 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 TRIM34Q9BYJ4 488 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 UPF3BQ9BZI7 483 aaKnown RBP13.05□□□□□ -0.32
TMEM260-208ENST00000555905 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 CNTNAP1P78357 1384 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 ATRNL1Q5VV63 1379 aa13.05□□□□□ -0.32
TMEM260-208ENST00000555905 MYH8P13535 1937 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 NT5C2P49902 561 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
TMEM260-208ENST00000555905 RRP12Q5JTH9 1297 aaKnown RBP13.04□□□□□ -0.32
TMEM260-208ENST00000555905 ANGEL2Q5VTE6 544 aaKnown RBP13.04□□□□□ -0.32
TMEM260-208ENST00000555905 CRACR2BQ8N4Y2 399 aaPredicted RBP13.04□□□□□ -0.32
TMEM260-208ENST00000555905 CSRNP1Q96S65 589 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 EHD4Q9H223 541 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 NEDD4P46934 1319 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 PITPNM2Q9BZ72 1349 aa13.04□□□□□ -0.32
TMEM260-208ENST00000555905 DDTLA6NHG4 134 aaPredicted RBP13.03□□□□□ -0.32
TMEM260-208ENST00000555905 B4E1Z4 1266 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 ORC4O43929 436 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 FGRP09769 529 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 RPS6KB1P23443 525 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 MCM5P33992 734 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 RASA3Q14644 834 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 DHX32Q7L7V1 743 aaKnown RBP13.03□□□□□ -0.32
TMEM260-208ENST00000555905 SH3BP5LQ7L8J4 393 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
TMEM260-208ENST00000555905 FOXP4Q8IVH2 680 aaPredicted RBP13.03□□□□□ -0.32
TMEM260-208ENST00000555905 ESR2Q92731 530 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 DCPSQ96C86 337 aaKnown RBP13.03□□□□□ -0.32
TMEM260-208ENST00000555905 DYNLL2Q96FJ2 89 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 TMEM39BQ9GZU3 492 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 TAF1DQ9H5J8 278 aaPredicted RBP13.03□□□□□ -0.32
TMEM260-208ENST00000555905 INCENPQ9NQS7 918 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 PDRG1Q9NUG6 133 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 SWAP70Q9UH65 585 aa13.03□□□□□ -0.32
TMEM260-208ENST00000555905 ASTN2O75129 1339 aaPredicted RBP13.03□□□□□ -0.32
TMEM260-208ENST00000555905 SMIM22K7EJ46 135 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.33
TMEM260-208ENST00000555905 KDM4AO75164 1064 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 CPA1P15085 419 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-208ENST00000555905 CDK8P49336 464 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 FGD1P98174 961 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 EVX2Q03828 476 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-208ENST00000555905 MB21D2Q8IYB1 491 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-208ENST00000555905 ZNF444Q8N0Y2 327 aaPredicted RBP13.02□□□□□ -0.33
TMEM260-208ENST00000555905 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
TMEM260-208ENST00000555905 DEFB129Q9H1M3 183 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMEM260-208ENST00000555905 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 WDR19Q8NEZ3 1342 aa13.02□□□□□ -0.33
TMEM260-208ENST00000555905 PRC1O43663 620 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 PRDM1O75626 825 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 MCM2P49736 904 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 GABPAQ06546 454 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
TMEM260-208ENST00000555905 SULF1Q8IWU6 871 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 SLC44A5Q8NCS7 719 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 HOOK2Q96ED9 719 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 HERC5Q9UII4 1024 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms