RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 BRPF3Q9ULD4 1205 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-233ENST00000555816 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
ATXN3-233ENST00000555816 ZNF423Q2M1K9 1284 aa7.74□□□□□ -1.17
ATXN3-233ENST00000555816 CDPF1Q6NVV7 123 aa7.74□□□□□ -1.17
ATXN3-233ENST00000555816 ZAR1Q86SH2 424 aa7.74□□□□□ -1.17
ATXN3-233ENST00000555816 FBXL6Q8N531 539 aa7.74□□□□□ -1.17
ATXN3-233ENST00000555816 TCF12Q99081 682 aa7.74□□□□□ -1.17
ATXN3-233ENST00000555816 ADGRE2Q9UHX3 823 aa7.74□□□□□ -1.17
ATXN3-233ENST00000555816 RNF114Q9Y508 228 aa7.74□□□□□ -1.17
ATXN3-233ENST00000555816 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
ATXN3-233ENST00000555816 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
ATXN3-233ENST00000555816 ADH5P11766 374 aa7.73□□□□□ -1.17
ATXN3-233ENST00000555816 LTKP29376 864 aa7.73□□□□□ -1.17
ATXN3-233ENST00000555816 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-233ENST00000555816 POU4F3Q15319 338 aa7.73□□□□□ -1.17
ATXN3-233ENST00000555816 DUSP27Q5VZP5 1158 aa7.73□□□□□ -1.17
ATXN3-233ENST00000555816 BSDC1Q9NW68 430 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-233ENST00000555816 PRKAG2Q9UGJ0 569 aa7.73□□□□□ -1.17
ATXN3-233ENST00000555816 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
ATXN3-233ENST00000555816 FYCO1Q9BQS8 1478 aa7.73□□□□□ -1.17
ATXN3-233ENST00000555816 INO80Q9ULG1 1556 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-233ENST00000555816 CYP26A1O43174 497 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 B3GALT4O96024 378 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 ITPKAP23677 461 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 MAOBP27338 520 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 VSIG10LQ86VR7 867 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 TBC1D32Q96NH3 1257 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 GSX1Q9H4S2 264 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-233ENST00000555816 CCDC39Q9UFE4 941 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
ATXN3-233ENST00000555816 NDUFB5O43674 189 aa7.71□□□□□ -1.18
ATXN3-233ENST00000555816 KCNA6P17658 529 aa7.71□□□□□ -1.18
ATXN3-233ENST00000555816 GRIA4P48058 902 aa7.71□□□□□ -1.18
ATXN3-233ENST00000555816 CORO1BQ9BR76 489 aa7.71□□□□□ -1.18
ATXN3-233ENST00000555816 DNAJC25Q9H1X3 360 aa7.71□□□□□ -1.18
ATXN3-233ENST00000555816 RAD18Q9NS91 495 aa7.71□□□□□ -1.18
ATXN3-233ENST00000555816 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
ATXN3-233ENST00000555816 METTL12A8MUP2 240 aa7.7□□□□□ -1.18
ATXN3-233ENST00000555816 CPNE3O75131 537 aaKnown RBP7.7□□□□□ -1.18
ATXN3-233ENST00000555816 POLR3DP05423 398 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-233ENST00000555816 HNRNPUQ00839 825 aaKnown RBP eCLIP7.7□□□□□ -1.18
ATXN3-233ENST00000555816 PDE4CQ08493 712 aa7.7□□□□□ -1.18
ATXN3-233ENST00000555816 AP3B2Q13367 1082 aa7.7□□□□□ -1.18
ATXN3-233ENST00000555816 ZNF211Q13398 564 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-233ENST00000555816 RPS26P11Q5JNZ5 115 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-233ENST00000555816 GLYCTKQ8IVS8 523 aa7.7□□□□□ -1.18
ATXN3-233ENST00000555816 ANO2Q9NQ90 1003 aa7.7□□□□□ -1.18
ATXN3-233ENST00000555816 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
ATXN3-233ENST00000555816 SPRED3Q2MJR0 410 aa7.69□□□□□ -1.18
ATXN3-233ENST00000555816 AGBL5Q8NDL9 886 aa7.69□□□□□ -1.18
ATXN3-233ENST00000555816 GATA6Q92908 595 aa7.69□□□□□ -1.18
ATXN3-233ENST00000555816 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
ATXN3-233ENST00000555816 ACTL7BQ9Y614 415 aa7.69□□□□□ -1.18
ATXN3-233ENST00000555816 TMEM94Q12767 1356 aa7.69□□□□□ -1.18
ATXN3-233ENST00000555816 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
ATXN3-233ENST00000555816 CCDC141Q6ZP82 1450 aa7.68□□□□□ -1.18
ATXN3-233ENST00000555816 ADGBQ8N7X0 1667 aa7.68□□□□□ -1.18
ATXN3-233ENST00000555816 ECM1Q16610 540 aa7.68□□□□□ -1.18
ATXN3-233ENST00000555816 ZNF772Q68DY9 489 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-233ENST00000555816 FAM129BQ96TA1 746 aa7.68□□□□□ -1.18
ATXN3-233ENST00000555816 EHD4Q9H223 541 aa7.68□□□□□ -1.18
ATXN3-233ENST00000555816 SEMA6CQ9H3T2 930 aa7.68□□□□□ -1.18
ATXN3-233ENST00000555816 ZNF576Q9H609 170 aa7.68□□□□□ -1.18
ATXN3-233ENST00000555816 CEP162Q5TB80 1403 aa7.68□□□□□ -1.18
ATXN3-233ENST00000555816 SCAF11Q99590 1463 aaKnown RBP7.68□□□□□ -1.18
ATXN3-233ENST00000555816 NFICP08651 508 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 ADMP35318 185 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 ARHGAP4P98171 946 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 AKAP4Q5JQC9 854 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 PRPF40BQ6NWY9 871 aaKnown RBP7.67□□□□□ -1.18
ATXN3-233ENST00000555816 CBLL1Q75N03 491 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 DYMQ7RTS9 669 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 ABI1Q8IZP0 508 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 TRAK1Q9UPV9 953 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 JCADQ9P266 1359 aa7.67□□□□□ -1.18
ATXN3-233ENST00000555816 AOC2O75106 756 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 JUNBP17275 347 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-233ENST00000555816 ASPAP45381 313 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 OGFOD3Q6PK18 319 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 SEZ6L2Q6UXD5 910 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 TP53INP2Q8IXH6 220 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 ASIC4Q96FT7 647 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 TRIM56Q9BRZ2 755 aaKnown RBP7.66□□□□□ -1.18
ATXN3-233ENST00000555816 PPP4R2Q9NY27 417 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 TMEM2Q9UHN6 1383 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 ERVK-7P63135 1459 aa7.66□□□□□ -1.18
ATXN3-233ENST00000555816 RNF17Q9BXT8 1623 aaKnown RBP7.66□□□□□ -1.18
ATXN3-233ENST00000555816 POLR1AO95602 1720 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-233ENST00000555816 H3BRB1 525 aa7.65□□□□□ -1.18
ATXN3-233ENST00000555816 SLFN14P0C7P3 912 aa7.65□□□□□ -1.18
ATXN3-233ENST00000555816 IQGAP1P46940 1657 aa7.65□□□□□ -1.18
ATXN3-233ENST00000555816 NCOA2Q15596 1464 aa7.65□□□□□ -1.18
ATXN3-233ENST00000555816 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
ATXN3-233ENST00000555816 TUT1Q9H6E5 874 aaKnown RBP7.65□□□□□ -1.18
ATXN3-233ENST00000555816 ARHGAP23Q9P227 1491 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms