RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 USP5P45974 858 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 FOSBP53539 338 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 ST5P78524 1137 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 ANO1Q5XXA6 986 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 CCDC102BQ68D86 513 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 OLFM4Q6UX06 510 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 LEKR1Q6ZMV7 388 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 SRLQ86TD4 932 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 ADAM21Q9UKJ8 722 aa12.23□□□□□ -0.45
MTHFD1-210ENST00000555252 A0A087WWV3 80 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 ERLIN1O75477 346 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 PFKFB1P16118 471 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 PDE6AP16499 860 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 TNNT3P45378 269 aaPredicted RBP12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 GUCY1B3Q02153 619 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 ARAP2Q8WZ64 1704 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 BAG1Q99933 345 aaPredicted RBP12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 PARD6BQ9BYG5 372 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 PIH1D3Q9NQM4 214 aaKnown RBP12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 AKAP11Q9UKA4 1901 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 HPSEQ9Y251 543 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 ZNF532Q9HCE3 1301 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 SH2B2O14492 632 aaPredicted RBP12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 FANCGO15287 622 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 IDH1O75874 414 aaKnown RBP12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 SLC39A14Q15043 492 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 LONRF2Q1L5Z9 754 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 PI16Q6UXB8 463 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 CEP112Q8N8E3 955 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 RAB21Q9UL25 225 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 CLIC4Q9Y696 253 aa12.22□□□□□ -0.45
MTHFD1-210ENST00000555252 TCRBV5S4A2TA0A5A2 114 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 SYKP43405 635 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 GNG11P61952 73 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 MAP3K12Q12852 859 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 PARP10Q53GL7 1025 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 HDXQ7Z353 690 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 MSANTD4Q8NCY6 345 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 NAA15Q9BXJ9 866 aaKnown RBP12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 GBP3Q9H0R5 595 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 MKRN1Q9UHC7 482 aaKnown RBP12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 DACH1Q9UI36 760 aa12.21□□□□□ -0.45
MTHFD1-210ENST00000555252 NUP98P52948 1817 aa12.21□□□□□ -0.46
MTHFD1-210ENST00000555252 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 APPP05067 770 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 GNAT2P19087 354 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 PHKA1P46020 1223 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 METAP2P50579 478 aaKnown RBP eCLIP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 SRGAP1Q7Z6B7 1085 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 ERCC4Q92889 916 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 STRBPQ96SI9 672 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 CNNM2Q9H8M5 875 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 HOOK1Q9UJC3 728 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 COL22A1Q8NFW1 1626 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 ROBO1Q9Y6N7 1651 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 ATP1A3P13637 1013 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 EIF5P55010 431 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 KIF23Q02241 960 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 GNL2Q13823 731 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 CT47A1Q5JQC4 288 aaPredicted RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 SGMS1Q86VZ5 419 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 TBC1D10CQ8IV04 446 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 SPATA5Q8NB90 893 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 MTA3Q9BTC8 594 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 ACBD3Q9H3P7 528 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 BRMS1Q9HCU9 246 aa12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 RRP15Q9Y3B9 282 aaKnown RBP12.2□□□□□ -0.46
MTHFD1-210ENST00000555252 UBN2Q6ZU65 1347 aa12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 WNK3Q9BYP7 1800 aa12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 TOM1O60784 492 aa12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 LIFRP42702 1097 aa12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 FBXW7Q969H0 707 aa12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 SYTL4Q96C24 671 aaPredicted RBP12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 KRT23Q9C075 422 aa12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 THRAP3Q9Y2W1 955 aaKnown RBP12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 STK36Q9NRP7 1315 aa12.19□□□□□ -0.46
MTHFD1-210ENST00000555252 BIN1O00499 593 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 NOP2P46087 812 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 LMAN1P49257 510 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 SPECC1LQ69YQ0 1117 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 CYB5R4Q7L1T6 521 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 WASF1Q92558 559 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 DPF2Q92785 391 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 PANX2Q96RD6 677 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 WDR24Q96S15 920 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 ALG1Q9BT22 464 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 ZBTB43O43298 467 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 POLR3DP05423 398 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms