RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 IFNL2Q8IZJ0 200 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 HSD3B7Q9H2F3 369 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
SYNE3-203ENST00000554873 RTEL1Q9NZ71 1219 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 H7C1W4 665 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 RHOXF2BP0C7M4 288 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 GCFC2P16383 781 aaKnown RBP17.78■□□□□ 0.44
SYNE3-203ENST00000554873 NF2P35240 595 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 ADALQ6DHV7 355 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 RHOXF2Q9BQY4 288 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 MAST3O60307 1309 aa17.78■□□□□ 0.44
SYNE3-203ENST00000554873 BIRC2Q13490 618 aa17.77■□□□□ 0.44
SYNE3-203ENST00000554873 KARSQ15046 597 aaKnown RBP17.77■□□□□ 0.44
SYNE3-203ENST00000554873 IGSF22Q8N9C0 903 aa17.77■□□□□ 0.44
SYNE3-203ENST00000554873 RNF113AO15541 343 aaKnown RBP17.77■□□□□ 0.44
SYNE3-203ENST00000554873 SLC3A2P08195 630 aaKnown RBP17.77■□□□□ 0.44
SYNE3-203ENST00000554873 NDUFA8P51970 172 aa17.77■□□□□ 0.44
SYNE3-203ENST00000554873 PREPLQ4J6C6 727 aaPredicted RBP17.77■□□□□ 0.44
SYNE3-203ENST00000554873 FMNL3Q8IVF7 1028 aa17.77■□□□□ 0.44
SYNE3-203ENST00000554873 TEX11Q8IYF3 940 aa17.77■□□□□ 0.44
SYNE3-203ENST00000554873 N4BP2L2Q92802 583 aaPredicted RBP17.77■□□□□ 0.44
SYNE3-203ENST00000554873 CAPN7Q9Y6W3 813 aa17.77■□□□□ 0.44
SYNE3-203ENST00000554873 A0A1W2PQ27 194 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 A0A1W2PQ64 194 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 A0A1W2PQD8 194 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 TMCO5BA8MYB1 307 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 BIN1O00499 593 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 IRF6O14896 467 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 IRX1P78414 480 aaPredicted RBP17.76■□□□□ 0.43
SYNE3-203ENST00000554873 ZKSCAN4Q969J2 545 aaPredicted RBP17.76■□□□□ 0.43
SYNE3-203ENST00000554873 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 NEBLO76041 1014 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 AMOTL1Q8IY63 956 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 LINC00301Q8NCQ3 95 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 CLIC4Q9Y696 253 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 ATXN2Q99700 1313 aaKnown RBP17.76■□□□□ 0.43
SYNE3-203ENST00000554873 SHTN1A0MZ66 631 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 M0R2C6 588 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 CYP27B1O15528 508 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 MYO1BO43795 1136 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
SYNE3-203ENST00000554873 IRAK1P51617 712 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 LRRC24Q50LG9 513 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 WDR93Q6P2C0 686 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 DCAF5Q96JK2 942 aa17.76■□□□□ 0.43
SYNE3-203ENST00000554873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.76■□□□□ 0.43
SYNE3-203ENST00000554873 H0YHG0 523 aa17.75■□□□□ 0.43
SYNE3-203ENST00000554873 SARNPP82979 210 aaKnown RBP17.75■□□□□ 0.43
SYNE3-203ENST00000554873 TBX2Q13207 712 aaPredicted RBP17.75■□□□□ 0.43
SYNE3-203ENST00000554873 XAGE2Q96GT9 111 aa17.75■□□□□ 0.43
SYNE3-203ENST00000554873 ZNF594Q96JF6 807 aaPredicted RBP17.75■□□□□ 0.43
SYNE3-203ENST00000554873 NEDD4P46934 1319 aa17.75■□□□□ 0.43
SYNE3-203ENST00000554873 TMEM232C9JQI7 657 aa17.75■□□□□ 0.43
SYNE3-203ENST00000554873 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
SYNE3-203ENST00000554873 IL15P40933 162 aaPredicted RBP17.75■□□□□ 0.43
SYNE3-203ENST00000554873 FNTAP49354 379 aa17.75■□□□□ 0.43
SYNE3-203ENST00000554873 TMED8Q6PL24 325 aaPredicted RBP17.75■□□□□ 0.43
SYNE3-203ENST00000554873 OSBP2Q969R2 916 aa17.75■□□□□ 0.43
SYNE3-203ENST00000554873 KAT14Q9H8E8 782 aa17.75■□□□□ 0.43
SYNE3-203ENST00000554873 MEGF6O75095 1541 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 KLHL33A6NCF5 533 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 MYL5Q02045 173 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 CRYMQ14894 314 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 KIF4BQ2VIQ3 1234 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 TICAM2Q86XR7 235 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 FAM76AQ8TAV0 307 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 CTAGE15A4D2H0 777 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 NBPF26B4DH59 902 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 FSBPO95073 299 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 CCDC175P0C221 793 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 CTAGE8P0CG41 777 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 STK38Q15208 465 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 SF3A1Q15459 793 aaKnown RBP17.74■□□□□ 0.43
SYNE3-203ENST00000554873 NBPF14Q5TI25 921 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 NBPF10Q6P3W6 841 aaKnown RBP17.74■□□□□ 0.43
SYNE3-203ENST00000554873 CTAGE6Q86UF2 777 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 CTAGE4Q8IX94 777 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 FBXL16Q8N461 479 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 NBPF15Q8N660 670 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 IRX2Q9BZI1 471 aaPredicted RBP17.74■□□□□ 0.43
SYNE3-203ENST00000554873 MRPL44Q9H9J2 332 aaKnown RBP17.74■□□□□ 0.43
SYNE3-203ENST00000554873 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
SYNE3-203ENST00000554873 KIF5CO60282 957 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 BCAS4Q8TDM0 211 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 ODF2LQ9ULJ1 636 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 ABCC6O95255 1503 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 EYA2O00167 538 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 PAX7P23759 505 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 PIP4K2BP78356 416 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 NAIF1Q69YI7 327 aaPredicted RBP17.73■□□□□ 0.43
SYNE3-203ENST00000554873 TC2NQ8N9U0 490 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 DESI2Q9BSY9 194 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 CD248Q9HCU0 757 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 HPCAL4Q9UM19 191 aa17.73■□□□□ 0.43
SYNE3-203ENST00000554873 MRPL12P52815 198 aaKnown RBP17.72■□□□□ 0.43
SYNE3-203ENST00000554873 HAND2P61296 217 aa17.72■□□□□ 0.43
SYNE3-203ENST00000554873 TTLL7Q6ZT98 887 aa17.72■□□□□ 0.43
SYNE3-203ENST00000554873 PDILTQ8N807 584 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms