RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CCDC51Q96ER9 411 aa15.58■□□□□ 0.09
VTI1B-204ENST00000554659 TSKSQ9UJT2 592 aa15.58■□□□□ 0.09
VTI1B-204ENST00000554659 ASIC2Q16515 512 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 UTP14CQ5TAP6 766 aaKnown RBP15.58■□□□□ 0.08
VTI1B-204ENST00000554659 GPR161Q8N6U8 529 aaKnown RBP15.58■□□□□ 0.08
VTI1B-204ENST00000554659 WDR66Q8TBY9 1149 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 IQCDQ96DY2 449 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 PLXNC1O60486 1568 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 SLC9C1Q4G0N8 1177 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 KIAA1524Q8TCG1 905 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 TCHPQ9BT92 498 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 GOLGA6BA6NDN3 693 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 ATP5JP18859 108 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 MTX1Q13505 466 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 HAUS3Q68CZ6 603 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 INTS8Q75QN2 995 aaKnown RBP15.58■□□□□ 0.08
VTI1B-204ENST00000554659 STMN2Q93045 179 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 XPO4Q9C0E2 1151 aaKnown RBP15.58■□□□□ 0.08
VTI1B-204ENST00000554659 CSRNP2Q9H175 543 aa15.58■□□□□ 0.08
VTI1B-204ENST00000554659 ALDH3A1P30838 453 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 HPDP32754 393 aaPredicted RBP15.57■□□□□ 0.08
VTI1B-204ENST00000554659 RUFY4Q6ZNE9 571 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 ZNF354CQ86Y25 554 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 ACSBG1Q96GR2 724 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 UTP11Q9Y3A2 253 aaKnown RBP15.57■□□□□ 0.08
VTI1B-204ENST00000554659 ARHGEF10O15013 1369 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 GIGYF1O75420 1035 aaPredicted RBP15.57■□□□□ 0.08
VTI1B-204ENST00000554659 VIMP08670 466 aaKnown RBP15.57■□□□□ 0.08
VTI1B-204ENST00000554659 DDB1Q16531 1140 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 RPGRIP1Q96KN7 1286 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 TRIM7Q9C029 511 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 CPSF2Q9P2I0 782 aaKnown RBP15.57■□□□□ 0.08
VTI1B-204ENST00000554659 TNFAIP3P21580 790 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 OAS2P29728 719 aaKnown RBP15.57■□□□□ 0.08
VTI1B-204ENST00000554659 INPP5BP32019 993 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 GCKRQ14397 625 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 RPUSD2Q8IZ73 545 aaKnown RBP15.57■□□□□ 0.08
VTI1B-204ENST00000554659 GLT8D2Q9H1C3 349 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 NCKAP5LQ9HCH0 1330 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 CETN3O15182 167 aa15.57■□□□□ 0.08
VTI1B-204ENST00000554659 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.57■□□□□ 0.08
VTI1B-204ENST00000554659 CALUO43852 315 aaPredicted RBP15.56■□□□□ 0.08
VTI1B-204ENST00000554659 PARP10Q53GL7 1025 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 CCDC110Q8TBZ0 833 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 MIPOL1Q8TD10 442 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 KIFAP3Q92845 792 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 TAB2Q9NYJ8 693 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 TXNDC16Q9P2K2 825 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 E7EWF7 191 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 ZWINTO95229 277 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 PPFIA1Q13136 1202 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 PAK2Q13177 524 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 OGFOD1Q8N543 542 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 MAPK8IP1Q9UQF2 711 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 RGS12O14924 1447 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 ZNF274Q96GC6 653 aaPredicted RBP15.56■□□□□ 0.08
VTI1B-204ENST00000554659 KIAA1468Q9P260 1216 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 MKRN1Q9UHC7 482 aaKnown RBP15.56■□□□□ 0.08
VTI1B-204ENST00000554659 WWC3Q9ULE0 1092 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 STK24Q9Y6E0 443 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 IBTKQ9P2D0 1353 aaPredicted RBP15.56■□□□□ 0.08
VTI1B-204ENST00000554659 PCK1P35558 622 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 BRD3Q15059 726 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 MYSM1Q5VVJ2 828 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 SSH3Q8TE77 659 aa15.56■□□□□ 0.08
VTI1B-204ENST00000554659 ZC3H12CQ9C0D7 883 aaKnown RBP15.56■□□□□ 0.08
VTI1B-204ENST00000554659 SPOPO43791 374 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 CCNT1O60563 726 aaKnown RBP15.55■□□□□ 0.08
VTI1B-204ENST00000554659 PDE8AO60658 829 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 FCHSD1Q86WN1 690 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 ARHGAP25P42331 645 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 MAGEA1P43355 309 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 KRT25Q7Z3Z0 450 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 UBL4BQ8N7F7 174 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 TMEM87AQ8NBN3 555 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 CLUL1Q15846 466 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 PPP1R12CQ9BZL4 782 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 FEZ2Q9UHY8 353 aaPredicted RBP15.55■□□□□ 0.08
VTI1B-204ENST00000554659 CFAP157Q5JU67 520 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 CCDC84Q86UT8 332 aaPredicted RBP15.55■□□□□ 0.08
VTI1B-204ENST00000554659 NELFBQ8WX92 580 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 PHKBQ93100 1093 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
VTI1B-204ENST00000554659 SH3TC1Q8TE82 1336 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 ABCC2Q92887 1545 aa15.55■□□□□ 0.08
VTI1B-204ENST00000554659 FAM135BQ49AJ0 1406 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 MRPS9P82933 396 aaKnown RBP15.54■□□□□ 0.08
VTI1B-204ENST00000554659 SMC1BQ8NDV3 1235 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 MRFAP1L1Q96HT8 127 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 MTMR6Q9Y217 621 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 CERS3Q8IU89 383 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 ZSWIM6Q9HCJ5 1215 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 NONOQ15233 471 aaKnown RBP eCLIP15.54■□□□□ 0.08
VTI1B-204ENST00000554659 WHAMMP3Q1A5X7 153 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 CFAP221Q4G0U5 840 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 LPIN2Q92539 896 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 NUCKS1Q9H1E3 243 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms