RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CALCOCO1Q9P1Z2 691 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 SH3BGRL2Q9UJC5 107 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 POLGP54098 1239 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC30Q5VVM6 783 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 TRIM7Q9C029 511 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CHPF2Q9P2E5 772 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 MYBBP1AQ9BQG0 1328 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CLUL1Q15846 466 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 FBXW10Q5XX13 1052 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 ASIC1P78348 528 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CWC25Q9NXE8 425 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 RBBP5Q15291 538 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 SETDB2Q96T68 719 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 NSRP1Q9H0G5 558 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC18Q5T9S5 1454 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 SCN2AQ99250 2005 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 LUC7LQ9NQ29 371 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 SLC16A2P36021 539 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 RALGDSQ12967 914 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 SH2D4BQ5SQS7 431 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 NAA35Q5VZE5 725 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CTAGE3PQ8IX95 158 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 AFAP1L1Q8TED9 768 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PDCD6IPQ8WUM4 868 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 DNAJC17Q9NVM6 304 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 TAL1P17542 331 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 PPP1R7Q15435 360 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 UBLCP1Q8WVY7 318 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 NOC2LQ9Y3T9 749 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CBFA2T2O43439 604 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 BAG4O95429 457 aaKnown RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC12Q8WUD4 166 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 LEO1Q8WVC0 666 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-212ENST00000554584 BLZF1Q9H2G9 400 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 ATRXP46100 2492 aa3.69□□□□□ -1.82
SYNE2-212ENST00000554584 ERBINQ96RT1 1412 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 JADE1Q6IE81 842 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SCARA5Q6ZMJ2 495 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 EEF2KMTQ96G04 330 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 BRWD1Q9NSI6 2320 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 MAP3K7CLP57077 242 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 HLA-DPA1P20036 260 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TFCP2Q12800 502 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TCIRG1Q13488 830 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 HIF1AQ16665 826 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SCARA3Q6AZY7 606 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SPDL1Q96EA4 605 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SLC38A10Q9HBR0 1119 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TPX2Q9ULW0 747 aaKnown RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 NDUFB5O43674 189 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TGFBRAP1Q8WUH2 860 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 MXD3Q9BW11 206 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TRIM55Q9BYV6 548 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC85CA6NKD9 419 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 NPR1P16066 1061 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SNX19Q92543 992 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 EHMT1Q9H9B1 1298 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ATG3Q9NT62 314 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ASAP1Q9ULH1 1129 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 IQANK1A0A1B0GTG1 560 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 HIP1RO75146 1068 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 GMNNO75496 209 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ZSCAN20P17040 1043 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TCEA1P23193 301 aaKnown RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 INPP1P49441 399 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SRPK1Q96SB4 655 aaKnown RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SYTL2Q9HCH5 934 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 BRD4O60885 1362 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ATN1P54259 1190 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 AATFQ9NY61 560 aaKnown RBP eCLIP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 KCNJ14Q9UNX9 436 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 IVNS1ABPQ9Y6Y0 642 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 CFBP00751 764 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 PRPHP41219 470 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 KCNA1Q09470 495 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 VPS52Q8N1B4 723 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 GTF2A1LQ9UNN4 478 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 PRG4Q92954 1404 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 CEP164Q9UPV0 1460 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SPECC1L-ADORA2AF8WAN1 911 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SPECC1LQ69YQ0 1117 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 BNIPLQ7Z465 357 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 FZD1Q9UP38 647 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SMG6Q86US8 1419 aaKnown RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 OCM2P0CE71 109 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 OCMP0CE72 109 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SESN3P58005 492 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TIMM10P62072 90 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 MVPQ14764 893 aaKnown RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TEX11Q8IYF3 940 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 KIF18AQ8NI77 898 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 PNISRQ8TF01 805 aaKnown RBP3.68□□□□□ -1.82
SYNE2-212ENST00000554584 GLG1Q92896 1179 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 GRXCR2A6NFK2 248 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SERPINI2O75830 405 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 ANGPT1Q15389 498 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TRIML2Q8N7C3 387 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 TRIM75PA6NK02 468 aa3.68□□□□□ -1.82
SYNE2-212ENST00000554584 SPAG5Q96R06 1193 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms