RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ANKRD7Q92527 254 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 PCDHA5Q9Y5H7 936 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 DISP2A7MBM2 1401 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 MMP1P03956 469 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 UBASH3AP57075 661 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 FOXP4Q8IVH2 680 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 OSBPL5Q9H0X9 879 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 LOC102724428A0A0B4J2F2 783 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 CUTAO60888 179 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 CAMTA2O94983 1202 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 IFNAR1P17181 557 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 TOB1P50616 345 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 SIK1P57059 783 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 PPARAQ07869 468 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 DDB1Q16531 1140 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 ZNF827Q17R98 1081 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 KRBA2Q6ZNG9 492 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 PCDHB6Q9Y5E3 794 aa18.05■□□□□ 0.48
ARHGEF40-203ENST00000554514 NYAP1Q6ZVC0 841 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 STAG1Q8WVM7 1258 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 POLR2DO15514 142 aaKnown RBP18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 MYL5Q02045 173 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 E4F1Q66K89 784 aaPredicted RBP18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 ZNF654Q8IZM8 581 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 WASF1Q92558 559 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 TIGD1Q96MW7 591 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 HSD3B7Q9H2F3 369 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 FANCLQ9NW38 375 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 IMPACTQ9P2X3 320 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 TUBE1Q9UJT0 475 aa18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
ARHGEF40-203ENST00000554514 DYNLL1P63167 89 aaKnown RBP18.03■□□□□ 0.48
ARHGEF40-203ENST00000554514 PDE4BQ07343 736 aa18.03■□□□□ 0.48
ARHGEF40-203ENST00000554514 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
ARHGEF40-203ENST00000554514 TMEM232C9JQI7 657 aa18.03■□□□□ 0.48
ARHGEF40-203ENST00000554514 NTSR2O95665 410 aa18.03■□□□□ 0.48
ARHGEF40-203ENST00000554514 CCDC150Q8NCX0 1101 aa18.03■□□□□ 0.48
ARHGEF40-203ENST00000554514 ECM29Q5VYK3 1845 aa18.03■□□□□ 0.48
ARHGEF40-203ENST00000554514 FAM205CA6NFA0 338 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 PRR29P0C7W0 189 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 GNAT2P19087 354 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 C3orf67Q6ZVT6 689 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 FANCBQ8NB91 859 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 SERTAD1Q9UHV2 236 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 SLC4A8Q2Y0W8 1093 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 TRMT44Q8IYL2 757 aaKnown RBP18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 CRACR2BQ8N4Y2 399 aaPredicted RBP18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 PPP1R13BQ96KQ4 1090 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 VPS54Q9P1Q0 977 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 TNKSO95271 1327 aa18.02■□□□□ 0.48
ARHGEF40-203ENST00000554514 SYT10Q6XYQ8 523 aa18.02■□□□□ 0.47
ARHGEF40-203ENST00000554514 USP49Q70CQ1 688 aa18.02■□□□□ 0.47
ARHGEF40-203ENST00000554514 KIF18AQ8NI77 898 aa18.02■□□□□ 0.47
ARHGEF40-203ENST00000554514 STK36Q9NRP7 1315 aa18.02■□□□□ 0.47
ARHGEF40-203ENST00000554514 NUTM2BA6NNL0 878 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 NUTM2EB1AL46 878 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 IKBKBO14920 756 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 BMP6P22004 513 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 AKAP17AQ02040 695 aaKnown RBP18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 HOMER1Q86YM7 354 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 NUTM2AQ8IVF1 878 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 AK7Q96M32 723 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 CHD4Q14839 1912 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 KCNQ2O43526 872 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 DEXIO95424 95 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 ERFEQ4G0M1 354 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 PARP10Q53GL7 1025 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
ARHGEF40-203ENST00000554514 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
ARHGEF40-203ENST00000554514 NRDCO43847 1150 aa18■□□□□ 0.47
ARHGEF40-203ENST00000554514 GTF2E1P29083 439 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-203ENST00000554514 RNF41Q9H4P4 317 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-203ENST00000554514 JAG2Q9Y219 1238 aa18■□□□□ 0.47
ARHGEF40-203ENST00000554514 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
ARHGEF40-203ENST00000554514 EVX2Q03828 476 aa18■□□□□ 0.47
ARHGEF40-203ENST00000554514 MARCH10Q8NA82 808 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-203ENST00000554514 FBXO2Q9UK22 296 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-203ENST00000554514 POSTNQ15063 836 aa17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 COL4A1P02462 1669 aa17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 CCDC196A0A1B0GTZ2 297 aa17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 CDK11BP21127 795 aaKnown RBP17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 ESR2Q92731 530 aa17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 MAN1B1Q9UKM7 699 aa17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 NHSL1Q5SYE7 1610 aa17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 TOP1P11387 765 aaKnown RBP17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 RILPL1Q5EBL4 403 aa17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 FAM177A1Q8N128 213 aaPredicted RBP17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 CDC5LQ99459 802 aaKnown RBP17.99■□□□□ 0.47
ARHGEF40-203ENST00000554514 PLEKHA8P1O95397 391 aa17.98■□□□□ 0.47
ARHGEF40-203ENST00000554514 CSRNP2Q9H175 543 aa17.98■□□□□ 0.47
ARHGEF40-203ENST00000554514 LRP5O75197 1615 aa17.98■□□□□ 0.47
ARHGEF40-203ENST00000554514 CASP1P29466 404 aa17.98■□□□□ 0.47
ARHGEF40-203ENST00000554514 FMR1Q06787 632 aaKnown RBP eCLIP17.98■□□□□ 0.47
ARHGEF40-203ENST00000554514 ELF2Q15723 593 aa17.98■□□□□ 0.47
ARHGEF40-203ENST00000554514 FOXP1Q9H334 677 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF40-203ENST00000554514 V9GY48 417 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms