RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SYNGAP1Q96PV0 1343 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 KIAA0556O60303 1618 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 SIGLEC1Q9BZZ2 1709 aa6.42□□□□□ -1.38
ATXN3-227ENST00000554491 DISP1Q96F81 1524 aa6.41□□□□□ -1.38
ATXN3-227ENST00000554491 PAPLNO95428 1278 aa6.41□□□□□ -1.38
ATXN3-227ENST00000554491 PDIA4P13667 645 aaKnown RBP6.41□□□□□ -1.38
ATXN3-227ENST00000554491 JUNBP17275 347 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-227ENST00000554491 PLCL1Q15111 1095 aa6.41□□□□□ -1.38
ATXN3-227ENST00000554491 C14orf37Q86TY3 774 aa6.41□□□□□ -1.38
ATXN3-227ENST00000554491 PLD6Q8N2A8 252 aaKnown RBP6.41□□□□□ -1.38
ATXN3-227ENST00000554491 FANCD2OSQ96PS1 177 aa6.41□□□□□ -1.38
ATXN3-227ENST00000554491 DNAJC25Q9H1X3 360 aa6.41□□□□□ -1.38
ATXN3-227ENST00000554491 PCDHGC5Q9Y5F6 944 aa6.41□□□□□ -1.38
ATXN3-227ENST00000554491 LTBP4Q8N2S1 1624 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 GSTP1P09211 210 aaKnown RBP6.4□□□□□ -1.38
ATXN3-227ENST00000554491 CD96P40200 585 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 ID3Q02535 119 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 ZNF792Q3KQV3 632 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 CYP27C1Q4G0S4 372 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 PI16Q6UXB8 463 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 POU5F2Q8N7G0 328 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 CITED4Q96RK1 184 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 CSRNP1Q96S65 589 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 PIDD1Q9HB75 910 aa6.4□□□□□ -1.38
ATXN3-227ENST00000554491 ABCA9Q8IUA7 1624 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 LEFTY1O75610 366 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 C8AP07357 584 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 SLFN14P0C7P3 912 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 HCLS1P14317 486 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-227ENST00000554491 JAG1P78504 1218 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 TTLL4Q14679 1199 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 KIF4BQ2VIQ3 1234 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 TXNDC2Q86VQ3 553 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 SMYD4Q8IYR2 804 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-227ENST00000554491 STK35Q8TDR2 534 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 ATXN3LQ9H3M9 355 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 TRAK1Q9UPV9 953 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 RICTORQ6R327 1708 aa6.39□□□□□ -1.39
ATXN3-227ENST00000554491 RNGTTO60942 597 aaKnown RBP6.38□□□□□ -1.39
ATXN3-227ENST00000554491 NEFMP07197 916 aa6.38□□□□□ -1.39
ATXN3-227ENST00000554491 FCGRTP55899 365 aa6.38□□□□□ -1.39
ATXN3-227ENST00000554491 DTHD1Q6ZMT9 781 aa6.38□□□□□ -1.39
ATXN3-227ENST00000554491 PDZD3Q86UT5 571 aa6.38□□□□□ -1.39
ATXN3-227ENST00000554491 STK11IPQ8N1F8 1099 aa6.38□□□□□ -1.39
ATXN3-227ENST00000554491 ADAMTS6Q9UKP5 1117 aa6.38□□□□□ -1.39
ATXN3-227ENST00000554491 UGGT2Q9NYU1 1516 aa6.37□□□□□ -1.39
ATXN3-227ENST00000554491 FANCAO15360 1455 aa6.37□□□□□ -1.39
ATXN3-227ENST00000554491 YEATS2Q9ULM3 1422 aa6.37□□□□□ -1.39
ATXN3-227ENST00000554491 CD8BP10966 210 aa6.37□□□□□ -1.39
ATXN3-227ENST00000554491 NETO1Q8TDF5 533 aa6.37□□□□□ -1.39
ATXN3-227ENST00000554491 KCNB2Q92953 911 aa6.37□□□□□ -1.39
ATXN3-227ENST00000554491 KRT82Q9NSB4 513 aa6.37□□□□□ -1.39
ATXN3-227ENST00000554491 GPN3Q9UHW5 284 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-227ENST00000554491 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-227ENST00000554491 MISP3Q96FF7 219 aa6.36□□□□□ -1.39
ATXN3-227ENST00000554491 DUSP23Q9BVJ7 150 aa6.36□□□□□ -1.39
ATXN3-227ENST00000554491 MBNL3Q9NUK0 354 aaKnown RBP6.36□□□□□ -1.39
ATXN3-227ENST00000554491 TMEM39AQ9NV64 488 aa6.36□□□□□ -1.39
ATXN3-227ENST00000554491 ABCA8O94911 1581 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 NEO1Q92859 1461 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 RNASE1P07998 156 aaKnown RBP6.35□□□□□ -1.39
ATXN3-227ENST00000554491 FUT4P22083 530 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 PPP2R3AQ06190 1150 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 PDE4CQ08493 712 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 ZNF648Q5T619 568 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-227ENST00000554491 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 ERICH6BQ5W0A0 696 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 SULF2Q8IWU5 870 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 ISL2Q96A47 359 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 ALKBH8Q96BT7 664 aaKnown RBP6.35□□□□□ -1.39
ATXN3-227ENST00000554491 DMRTB1Q96MA1 342 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 RBCK1Q9BYM8 510 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 ZMYM4Q5VZL5 1548 aa6.35□□□□□ -1.39
ATXN3-227ENST00000554491 PTPRTO14522 1441 aa6.34□□□□□ -1.39
ATXN3-227ENST00000554491 POGZQ7Z3K3 1410 aa6.34□□□□□ -1.39
ATXN3-227ENST00000554491 ARID4BQ4LE39 1312 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-227ENST00000554491 OXCT1P55809 520 aa6.34□□□□□ -1.39
ATXN3-227ENST00000554491 ZC3H12AQ5D1E8 599 aaKnown RBP6.34□□□□□ -1.39
ATXN3-227ENST00000554491 MAP1SQ66K74 1059 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-227ENST00000554491 MPRIPQ6WCQ1 1025 aa6.34□□□□□ -1.39
ATXN3-227ENST00000554491 TMC7Q7Z402 723 aa6.34□□□□□ -1.39
ATXN3-227ENST00000554491 RC3H2Q9HBD1 1191 aaKnown RBP6.34□□□□□ -1.39
ATXN3-227ENST00000554491 NLRP2Q9NX02 1062 aa6.34□□□□□ -1.39
ATXN3-227ENST00000554491 PCOLCE2Q9UKZ9 415 aa6.34□□□□□ -1.39
ATXN3-227ENST00000554491 EFCAB5A4FU69 1503 aa6.34□□□□□ -1.39
ATXN3-227ENST00000554491 PHLDB1Q86UU1 1377 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 CTTNBP2Q8WZ74 1663 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 CFAP74Q9C0B2 1584 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 ARNTP27540 789 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 PRKCQQ04759 706 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 IFI16Q16666 785 aaKnown RBP6.33□□□□□ -1.4
ATXN3-227ENST00000554491 AOC3Q16853 763 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 NXPE4Q6UWF7 544 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 TOP6BLQ8N6T0 577 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 RETREG2Q8NC44 543 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 VAV3Q9UKW4 847 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 AKAP2Q9Y2D5 859 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 ZFYVE16Q7Z3T8 1539 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms