RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ERBINQ96RT1 1412 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 ADGRB3O60242 1522 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 GCC2Q8IWJ2 1684 aa5.02□□□□□ -1.61
SLIRP-202ENST00000553981 TMEM131LA2VDJ0 1609 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.01□□□□□ -1.61
SLIRP-202ENST00000553981 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 ESRRAP11474 423 aaPredicted RBP5.01□□□□□ -1.61
SLIRP-202ENST00000553981 YBX3P16989 372 aaKnown RBP eCLIP5.01□□□□□ -1.61
SLIRP-202ENST00000553981 MSMPQ1L6U9 139 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 PEAR1Q5VY43 1037 aaPredicted RBP5.01□□□□□ -1.61
SLIRP-202ENST00000553981 ALKBH2Q6NS38 261 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 SHISA5Q8N114 240 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 GIMAP7Q8NHV1 300 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 ASAP3Q8TDY4 903 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 SNX29Q8TEQ0 813 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 BHLHE41Q9C0J9 482 aaPredicted RBP5.01□□□□□ -1.61
SLIRP-202ENST00000553981 LATS2Q9NRM7 1088 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 SERPINA10Q9UK55 444 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 LEMD3Q9Y2U8 911 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 KDM5AP29375 1690 aaKnown RBP5.01□□□□□ -1.61
SLIRP-202ENST00000553981 NRXN3Q9Y4C0 1643 aa5.01□□□□□ -1.61
SLIRP-202ENST00000553981 FAM95CA0A1B0GW59 222 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 DRD2P14416 443 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 FOSL1P15407 271 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 NPR3P17342 541 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 SSFA2P28290 1259 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 NFKBIBQ15653 356 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 EXOSC6Q5RKV6 272 aaKnown RBP5□□□□□ -1.61
SLIRP-202ENST00000553981 CDPF1Q6NVV7 123 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 ABI1Q8IZP0 508 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 FBLIM1Q8WUP2 373 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 OSBPL1AQ9BXW6 950 aa5□□□□□ -1.61
SLIRP-202ENST00000553981 NKTRP30414 1462 aaKnown RBP5□□□□□ -1.61
SLIRP-202ENST00000553981 RIMS2Q9UQ26 1411 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 AHDC1Q5TGY3 1603 aaPredicted RBP4.99□□□□□ -1.61
SLIRP-202ENST00000553981 TMEM88BA6NKF7 163 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 METTL12A8MUP2 240 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 EHHADHQ08426 723 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 AAMPQ13685 434 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 CPSF6Q16630 551 aaKnown RBP eCLIP4.99□□□□□ -1.61
SLIRP-202ENST00000553981 BRINP3Q76B58 766 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 C2CD4AQ8NCU7 369 aaPredicted RBP4.99□□□□□ -1.61
SLIRP-202ENST00000553981 NRSN2Q9GZP1 204 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 CCDC39Q9UFE4 941 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 ANGEL1Q9UNK9 670 aaKnown RBP4.99□□□□□ -1.61
SLIRP-202ENST00000553981 AMOTL2Q9Y2J4 779 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 EID1Q9Y6B2 187 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 JCADQ9P266 1359 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 PLEKHG1Q9ULL1 1385 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 E9PCH4 1651 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 SHPRHQ149N8 1683 aa4.99□□□□□ -1.61
SLIRP-202ENST00000553981 RGS12O14924 1447 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 FGD6Q6ZV73 1430 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 FZD6O60353 706 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 PRNPP04156 253 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 ADMP35318 185 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 USP11P51784 963 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 GSTM4Q03013 218 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 SOX4Q06945 474 aaPredicted RBP4.98□□□□□ -1.61
SLIRP-202ENST00000553981 PAOXQ6QHF9 649 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 NFXL1Q6ZNB6 911 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 EZH1Q92800 747 aaPredicted RBP4.98□□□□□ -1.61
SLIRP-202ENST00000553981 METTL22Q9BUU2 404 aaPredicted RBP4.98□□□□□ -1.61
SLIRP-202ENST00000553981 ADGRL2O95490 1459 aa4.98□□□□□ -1.61
SLIRP-202ENST00000553981 UNC13BO14795 1591 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 MSH6P52701 1360 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 FAM13AO94988 1023 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 CTSBP07858 339 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 USP5P45974 858 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 ZAR1Q86SH2 424 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 GJD3Q8N144 294 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 TBC1D32Q96NH3 1257 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 ZFYVE28Q9HCC9 887 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 CCDC87Q9NVE4 849 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 PRKAG2Q9UGJ0 569 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 TBX22Q9Y458 520 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 XRN1Q8IZH2 1706 aaKnown RBP4.97□□□□□ -1.61
SLIRP-202ENST00000553981 NHSL1Q5SYE7 1610 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 MST1RQ04912 1400 aa4.97□□□□□ -1.61
SLIRP-202ENST00000553981 METP08581 1390 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 CYP26A1O43174 497 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 POLR3DP05423 398 aaPredicted RBP4.96□□□□□ -1.62
SLIRP-202ENST00000553981 ADH5P11766 374 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 CBLL1Q75N03 491 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 VSIG10LQ86VR7 867 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 GATA6Q92908 595 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 YIPF2Q9BWQ6 316 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 ACTL7BQ9Y614 415 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 ASXL1Q8IXJ9 1541 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 AFF2P51816 1311 aa4.96□□□□□ -1.62
SLIRP-202ENST00000553981 SETBP1Q9Y6X0 1596 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 PNPLA6Q8IY17 1366 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 A0A096LPE4 126 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 A0A1W2PPZ6 126 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 FAM170BA6NMN3 283 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 EIF4EBP3O60516 100 aaPredicted RBP4.95□□□□□ -1.62
SLIRP-202ENST00000553981 MAOBP27338 520 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 GRIA4P48058 902 aa4.95□□□□□ -1.62
SLIRP-202ENST00000553981 FKBP4Q02790 459 aaKnown RBP eCLIP4.95□□□□□ -1.62
SLIRP-202ENST00000553981 PCDH1Q08174 1060 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms