RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 DNAJC21Q5F1R6 531 aaKnown RBP11.5□□□□□ -0.57
CFAP54-204ENST00000553778 ARHGAP27Q6ZUM4 889 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 HDXQ7Z353 690 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 NBPF11Q86T75 865 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 DHX40Q8IX18 779 aaKnown RBP11.5□□□□□ -0.57
CFAP54-204ENST00000553778 GRAPLQ8TC17 118 aaPredicted RBP11.5□□□□□ -0.57
CFAP54-204ENST00000553778 KCNB2Q92953 911 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 BPIFA3Q9BQP9 254 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 LRRCC1Q9C099 1032 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 CHMP3Q9Y3E7 222 aa11.5□□□□□ -0.57
CFAP54-204ENST00000553778 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
CFAP54-204ENST00000553778 FOXO4P98177 505 aa11.49□□□□□ -0.57
CFAP54-204ENST00000553778 HOMER1Q86YM7 354 aa11.49□□□□□ -0.57
CFAP54-204ENST00000553778 FAM71BQ8TC56 605 aa11.49□□□□□ -0.57
CFAP54-204ENST00000553778 TBC1D22AQ8WUA7 517 aa11.49□□□□□ -0.57
CFAP54-204ENST00000553778 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
CFAP54-204ENST00000553778 CARD6Q9BX69 1037 aa11.49□□□□□ -0.57
CFAP54-204ENST00000553778 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
CFAP54-204ENST00000553778 GOLGB1Q14789 3259 aaKnown RBP11.49□□□□□ -0.57
CFAP54-204ENST00000553778 VPS37CA5D8V6 355 aaPredicted RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 ZSCAN12O43309 604 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 NR1I2O75469 434 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 TXLNAP40222 546 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 RPS8P62241 208 aaKnown RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 LMBR1LQ6UX01 489 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 TMC4Q7Z404 712 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 CEP57L1Q8IYX8 460 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 GOLGA1Q92805 767 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 CELF1Q92879 486 aaKnown RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 CCDC34Q96HJ3 373 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 CDC5LQ99459 802 aaKnown RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 PARD6BQ9BYG5 372 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 GREM2Q9H772 168 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 SEC31BQ9NQW1 1179 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 UTRNP46939 3433 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 DDX60Q8IY21 1712 aaKnown RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 URI1O94763 535 aaPredicted RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 ITGA6P23229 1130 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 IFIT5Q13325 482 aaKnown RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 E2F4Q16254 413 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 LRRC31Q6UY01 552 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 ANKRD18AQ8IVF6 992 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 SP8Q8IXZ3 490 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 MEIS3Q99687 375 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 LSG1Q9H089 658 aaKnown RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 BICC1Q9H694 974 aaKnown RBP11.48□□□□□ -0.57
CFAP54-204ENST00000553778 PDRG1Q9NUG6 133 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 RAB21Q9UL25 225 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 MRFAP1Q9Y605 127 aa11.48□□□□□ -0.57
CFAP54-204ENST00000553778 DLEC1Q9Y238 1755 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 ERLIN1O75477 346 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 IGHMBP2P38935 993 aaKnown RBP11.47□□□□□ -0.57
CFAP54-204ENST00000553778 ARMCX5Q6P1M9 558 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 EP400NLQ6ZTU2 488 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 C11orf57Q6ZUT1 292 aaPredicted RBP11.47□□□□□ -0.57
CFAP54-204ENST00000553778 CCDC83Q8IWF9 413 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 C7orf43Q8WVR3 580 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 KAZALD1Q96I82 304 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 ACBD3Q9H3P7 528 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 VPS18Q9P253 973 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 COL11A2P13942 1736 aaPredicted RBP11.47□□□□□ -0.57
CFAP54-204ENST00000553778 ERCC3P19447 782 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 TUBB2AQ13885 445 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 RILPL2Q969X0 211 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 DDX11Q96FC9 970 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 TUBB2BQ9BVA1 445 aa11.47□□□□□ -0.57
CFAP54-204ENST00000553778 ALDH8A1Q9H2A2 487 aaPredicted RBP11.47□□□□□ -0.57
CFAP54-204ENST00000553778 BRCA1P38398 1863 aaKnown RBP11.46□□□□□ -0.57
CFAP54-204ENST00000553778 ATXN2Q99700 1313 aaKnown RBP11.46□□□□□ -0.57
CFAP54-204ENST00000553778 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.58
CFAP54-204ENST00000553778 ERLIN2O94905 339 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 GNAI2P04899 355 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.58
CFAP54-204ENST00000553778 PPP2R3AQ06190 1150 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 RABL6Q3YEC7 729 aaPredicted RBP11.46□□□□□ -0.58
CFAP54-204ENST00000553778 BEND6Q5SZJ8 279 aaPredicted RBP11.46□□□□□ -0.58
CFAP54-204ENST00000553778 POTEDQ86YR6 584 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 MSANTD4Q8NCY6 345 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 BICD2Q8TD16 824 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 PGBD1Q96JS3 809 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 GBP3Q9H0R5 595 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 CFAP45Q9UL16 551 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 RTL9Q8NET4 1388 aa11.46□□□□□ -0.58
CFAP54-204ENST00000553778 LAMB2P55268 1798 aa11.45□□□□□ -0.58
CFAP54-204ENST00000553778 TMCO5BA8MYB1 307 aa11.45□□□□□ -0.58
CFAP54-204ENST00000553778 LARGE1O95461 756 aa11.45□□□□□ -0.58
CFAP54-204ENST00000553778 LRCH2Q5VUJ6 765 aa11.45□□□□□ -0.58
CFAP54-204ENST00000553778 CDC37L1Q7L3B6 337 aa11.45□□□□□ -0.58
CFAP54-204ENST00000553778 BSDC1Q9NW68 430 aaPredicted RBP11.45□□□□□ -0.58
CFAP54-204ENST00000553778 AKAP2Q9Y2D5 859 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms