RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 PRMT6Q96LA8 375 aaPredicted RBP16.57■□□□□ 0.24
ABCD4-219ENST00000553745 LRRC2Q9BYS8 371 aa16.57■□□□□ 0.24
ABCD4-219ENST00000553745 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
ABCD4-219ENST00000553745 GRPEL1Q9HAV7 217 aa16.57■□□□□ 0.24
ABCD4-219ENST00000553745 TRDNQ13061 729 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 DLGAP5Q15398 846 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 C12orf60Q5U649 245 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
ABCD4-219ENST00000553745 PRPF40AO75400 957 aaKnown RBP16.56■□□□□ 0.24
ABCD4-219ENST00000553745 ANTXR2P58335 489 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
ABCD4-219ENST00000553745 TOB2Q14106 344 aaPredicted RBP16.56■□□□□ 0.24
ABCD4-219ENST00000553745 RRP12Q5JTH9 1297 aaKnown RBP16.56■□□□□ 0.24
ABCD4-219ENST00000553745 Q6ZUG5 572 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 AMOTL1Q8IY63 956 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 CHAMP1Q96JM3 812 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 ZSCAN31Q96LW9 406 aaPredicted RBP16.56■□□□□ 0.24
ABCD4-219ENST00000553745 OSBPL5Q9H0X9 879 aaPredicted RBP16.56■□□□□ 0.24
ABCD4-219ENST00000553745 RNF41Q9H4P4 317 aaPredicted RBP16.56■□□□□ 0.24
ABCD4-219ENST00000553745 TOMM22Q9NS69 142 aa16.56■□□□□ 0.24
ABCD4-219ENST00000553745 LARGE1O95461 756 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 POLR3DP05423 398 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-219ENST00000553745 PLCD1P51178 756 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 C9orf131Q5VYM1 1079 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 MICALL2Q8IY33 904 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 PANK2Q9BZ23 570 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 ALDH8A1Q9H2A2 487 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-219ENST00000553745 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 MYOZ2Q9NPC6 264 aa16.55■□□□□ 0.24
ABCD4-219ENST00000553745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
ABCD4-219ENST00000553745 PRC1O43663 620 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 MCM5P33992 734 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 ZNF280AP59817 542 aaPredicted RBP16.54■□□□□ 0.24
ABCD4-219ENST00000553745 MTMR14Q8NCE2 650 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 GPT2Q8TD30 523 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 DPF2Q92785 391 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 KRT23Q9C075 422 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 SH2B1Q9NRF2 756 aaPredicted RBP16.54■□□□□ 0.24
ABCD4-219ENST00000553745 FAM198AQ9UFP1 575 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
ABCD4-219ENST00000553745 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 KDM4AO75164 1064 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 PRDM1O75626 825 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 EGFRP00533 1210 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 ZNF445P59923 1031 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 TCP10Q12799 353 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 FOXD4L5Q5VV16 416 aaPredicted RBP16.54■□□□□ 0.24
ABCD4-219ENST00000553745 GPC2Q8N158 579 aa16.54■□□□□ 0.24
ABCD4-219ENST00000553745 FOXD4L4Q8WXT5 416 aaPredicted RBP16.54■□□□□ 0.24
ABCD4-219ENST00000553745 ZBED3Q96IU2 234 aaPredicted RBP16.54■□□□□ 0.24
ABCD4-219ENST00000553745 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.54■□□□□ 0.24
ABCD4-219ENST00000553745 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
ABCD4-219ENST00000553745 FGRP09769 529 aa16.53■□□□□ 0.24
ABCD4-219ENST00000553745 PCP11498 1178 aaKnown RBP16.53■□□□□ 0.24
ABCD4-219ENST00000553745 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
ABCD4-219ENST00000553745 ZFPM1Q8IX07 1006 aa16.53■□□□□ 0.24
ABCD4-219ENST00000553745 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
ABCD4-219ENST00000553745 CNOT7Q9UIV1 285 aaKnown RBP16.53■□□□□ 0.24
ABCD4-219ENST00000553745 WDR19Q8NEZ3 1342 aa16.53■□□□□ 0.24
ABCD4-219ENST00000553745 WNT10BO00744 389 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 ST3GAL1Q11201 340 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 ANKRD1Q15327 319 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 NBPF9Q3BBW0 867 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 BRF1Q92994 677 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.24
ABCD4-219ENST00000553745 TMOD2Q9NZR1 351 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 ZSWIM5Q9P217 1185 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 ZNF70Q9UC06 446 aaPredicted RBP16.52■□□□□ 0.24
ABCD4-219ENST00000553745 TPCN1Q9ULQ1 816 aa16.52■□□□□ 0.24
ABCD4-219ENST00000553745 ORC4O43929 436 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 MMP14P50281 582 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 FGD1P98174 961 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 PDE4BQ07343 736 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 SAMD7Q7Z3H4 446 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 COL2A1P02458 1487 aaPredicted RBP16.51■□□□□ 0.23
ABCD4-219ENST00000553745 TCP10L2B9ZVM9 353 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 GRIN3BO60391 1043 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
ABCD4-219ENST00000553745 DDNO94850 711 aaPredicted RBP16.51■□□□□ 0.23
ABCD4-219ENST00000553745 ME3Q16798 604 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 TBC1D10BQ4KMP7 808 aaPredicted RBP16.51■□□□□ 0.23
ABCD4-219ENST00000553745 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
ABCD4-219ENST00000553745 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 ESR2Q92731 530 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
ABCD4-219ENST00000553745 DDTLA6NHG4 134 aaPredicted RBP16.5■□□□□ 0.23
ABCD4-219ENST00000553745 SH2B2O14492 632 aaPredicted RBP16.5■□□□□ 0.23
ABCD4-219ENST00000553745 RANBP6O60518 1105 aaKnown RBP16.5■□□□□ 0.23
ABCD4-219ENST00000553745 SYT1P21579 422 aa16.5■□□□□ 0.23
ABCD4-219ENST00000553745 KIF4BQ2VIQ3 1234 aa16.5■□□□□ 0.23
ABCD4-219ENST00000553745 ZSCAN23Q3MJ62 389 aa16.5■□□□□ 0.23
ABCD4-219ENST00000553745 CAVIN1Q6NZI2 390 aaKnown RBP16.5■□□□□ 0.23
ABCD4-219ENST00000553745 SH3BP5LQ7L8J4 393 aa16.5■□□□□ 0.23
ABCD4-219ENST00000553745 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
ABCD4-219ENST00000553745 ZKSCAN3Q9BRR0 538 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms