RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 MTHFSDQ2M296 383 aaKnown RBP7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 SH3D19Q5HYK7 790 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 CC2D2BQ6DHV5 1058 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 KRT26Q7Z3Y9 468 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 NPM2Q86SE8 214 aaKnown RBP7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 ALYREFQ86V81 257 aaKnown RBP7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 CD163Q86VB7 1156 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 FAM122AQ96E09 287 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 NLRP3Q96P20 1036 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 MTMR10Q9NXD2 777 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 PTPN22Q9Y2R2 807 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 UBR2Q8IWV8 1755 aa7.48□□□□□ -1.21
SMARCE1P3-201ENST00000553649 IL6STP40189 918 aaPredicted RBP7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 TM4SF4P48230 202 aa7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 CRY2Q49AN0 593 aa7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 NIM1KQ8IY84 436 aa7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 DDRGK1Q96HY6 314 aa7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 ZNF496Q96IT1 587 aaPredicted RBP7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 ZNF333Q96JL9 665 aa7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 SETDB2Q96T68 719 aa7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 GPAMQ9HCL2 828 aa7.47□□□□□ -1.21
SMARCE1P3-201ENST00000553649 RIC1Q4ADV7 1423 aa7.46□□□□□ -1.21
SMARCE1P3-201ENST00000553649 WTIPA6NIX2 430 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TRAK2O60296 914 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CHRNA4P43681 627 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PIP4K2AP48426 406 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TEFQ10587 303 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TRIM26Q12899 539 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CC2D1BQ5T0F9 858 aaKnown RBP7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CLEC4GQ6UXB4 293 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TAS1R3Q7RTX0 852 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 SNX27Q96L92 541 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ARHGEF10LQ9HCE6 1279 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 AKAP11Q9UKA4 1901 aa7.46□□□□□ -1.22
SMARCE1P3-201ENST00000553649 FAM177BA6PVY3 158 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 EGFRP00533 1210 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 A1BGP04217 495 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ALDH1B1P30837 517 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CAP1Q01518 475 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 HOMEZQ8IX15 550 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 VPS33BQ9H267 617 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CNOT7Q9UIV1 285 aaKnown RBP7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GDF2Q9UK05 429 aaPredicted RBP7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ZNRF3Q9ULT6 936 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PCDHB9Q9Y5E1 797 aa7.45□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ZNF609O15014 1411 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 KIAA0100Q14667 2235 aaKnown RBP7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ZBTB7BO15156 539 aaPredicted RBP7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PPIP5K2O43314 1243 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 KCNQ3O43525 872 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 FBXO45P0C2W1 286 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PHKA2P46019 1235 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 AOC3Q16853 763 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ZNF790Q6PG37 636 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 NBPF5PQ86XG9 351 aaPredicted RBP7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 IL27Q8NEV9 243 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 DPF3Q92784 378 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CDCA5Q96FF9 252 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 RAB6BQ9NRW1 208 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 MUC3AQ02505 3323 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 KIF7Q2M1P5 1343 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 HEG1Q9ULI3 1381 aa7.44□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GNAT3A8MTJ3 354 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 IL2RAP01589 272 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 HOXA10P31260 410 aaPredicted RBP7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CTBSQ01459 385 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 MOB2Q70IA6 237 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GOLGA6L1Q8N7Z2 621 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PNMA1Q8ND90 353 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 IL17REQ8NFR9 667 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 SHISA4Q96DD7 197 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 FMNL2Q96PY5 1086 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 BCL2L13Q9BXK5 485 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TEX13AQ9BXU3 409 aaPredicted RBP7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GOPCQ9HD26 462 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 HRH3Q9Y5N1 445 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TTC28Q96AY4 2481 aa7.43□□□□□ -1.22
SMARCE1P3-201ENST00000553649 LAMB4A4D0S4 1761 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 BTBD11A6QL63 1104 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ZBBXA8MT70 800 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 RAD17O75943 681 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 FKBP1BP68106 108 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TBC1D10BQ4KMP7 808 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CYP2U1Q7Z449 544 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 UBE2Q1Q7Z7E8 422 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GAS2L2Q8NHY3 880 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 BTBD6Q96KE9 485 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 RTFDC1Q9BY42 306 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 NDFIP2Q9NV92 336 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GGA1Q9UJY5 639 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ASTN2O75129 1339 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ABCC12Q96J65 1359 aa7.42□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PRAMEF22A3QJZ6 481 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 H7C1D1 291 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GTF2E1P29083 439 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CENPCQ03188 943 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms