RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 IL25Q9H293 177 aa9.62□□□□□ -0.87
SNRPN-206ENST00000553597 DCP1AQ9NPI6 582 aaPredicted RBP9.62□□□□□ -0.87
SNRPN-206ENST00000553597 COL2A1P02458 1487 aaPredicted RBP9.61□□□□□ -0.87
SNRPN-206ENST00000553597 MINDY4BA8MYZ0 360 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 HIP1O00291 1037 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 HLA-DOAP06340 250 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 CHMLP26374 656 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 MCMDC2Q4G0Z9 681 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 BMP2KLQ5H9B9 411 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 ARMC9Q7Z3E5 817 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 CERS3Q8IU89 383 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 SLC44A5Q8NCS7 719 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 DYNLL2Q96FJ2 89 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 CLMNQ96JQ2 1002 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.61□□□□□ -0.872e-53■■■■■ 172.3
SNRPN-206ENST00000553597 HELLSQ9NRZ9 838 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.61□□□□□ -0.87
SNRPN-206ENST00000553597 ATRNL1Q5VV63 1379 aa9.61□□□□□ -0.87
SNRPN-206ENST00000553597 GSG1L2A8MUP6 293 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 USP17L12C9JPN9 530 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 USP17L21D6R901 530 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 PPP1R12BO60237 982 aaPredicted RBP9.6□□□□□ -0.87
SNRPN-206ENST00000553597 CDC45O75419 566 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 USP2O75604 605 aaPredicted RBP9.6□□□□□ -0.87
SNRPN-206ENST00000553597 GDF11O95390 407 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 INPP5BP32019 993 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 PLCD1P51178 756 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 SHROOM1Q2M3G4 852 aaPredicted RBP9.6□□□□□ -0.87
SNRPN-206ENST00000553597 DCAF15Q66K64 600 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 CYP4F22Q6NT55 531 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 CCDC84Q86UT8 332 aaPredicted RBP9.6□□□□□ -0.87
SNRPN-206ENST00000553597 AMOTL1Q8IY63 956 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 ZKSCAN4Q969J2 545 aaPredicted RBP9.6□□□□□ -0.87
SNRPN-206ENST00000553597 ZNF341Q9BYN7 854 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 NAPBQ9H115 298 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 ELP3Q9H9T3 547 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 CREBZFQ9NS37 354 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
SNRPN-206ENST00000553597 FOXP2O15409 715 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 IGSF3O75054 1194 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 GNAT2P19087 354 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 IREB2P48200 963 aaKnown RBP9.59□□□□□ -0.87
SNRPN-206ENST00000553597 ZNF157P51786 506 aaPredicted RBP9.59□□□□□ -0.87
SNRPN-206ENST00000553597 HAND2P61296 217 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 CTDSPL2Q05D32 466 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 VGLL4Q14135 290 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 CTR9Q6PD62 1173 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 TMED8Q6PL24 325 aaPredicted RBP9.59□□□□□ -0.87
SNRPN-206ENST00000553597 SAPCD2Q86UD0 394 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 IFNL3Q8IZI9 196 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 RUFY2Q8WXA3 655 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 DNAJC18Q9H819 358 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 ATP8A2Q9NTI2 1148 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 CSADQ9Y600 493 aa9.59□□□□□ -0.87
SNRPN-206ENST00000553597 GREB1LQ9C091 1923 aaPredicted RBP9.58□□□□□ -0.88
SNRPN-206ENST00000553597 THSD7BQ9C0I4 1608 aa9.58□□□□□ -0.88
SNRPN-206ENST00000553597 PATL2C9JE40 543 aaKnown RBP9.58□□□□□ -0.88
SNRPN-206ENST00000553597 MPHOSPH10O00566 681 aaKnown RBP9.58□□□□□ -0.88
SNRPN-206ENST00000553597 HSPD1P10809 573 aaKnown RBP9.58□□□□□ -0.88
SNRPN-206ENST00000553597 MFAP1P55081 439 aaKnown RBP9.58□□□□□ -0.88
SNRPN-206ENST00000553597 CASC1Q6TDU7 716 aa9.58□□□□□ -0.88
SNRPN-206ENST00000553597 TTC6Q86TZ1 520 aa9.58□□□□□ -0.88
SNRPN-206ENST00000553597 HOOK2Q96ED9 719 aa9.58□□□□□ -0.88
SNRPN-206ENST00000553597 OTUD5Q96G74 571 aa9.58□□□□□ -0.88
SNRPN-206ENST00000553597 NACAP1Q9BZK3 213 aa9.58□□□□□ -0.88
SNRPN-206ENST00000553597 DHX36Q9H2U1 1008 aaKnown RBP9.58□□□□□ -0.88
SNRPN-206ENST00000553597 TOMM22Q9NS69 142 aa9.58□□□□□ -0.88
SNRPN-206ENST00000553597 PI4KBQ9UBF8 816 aa9.58□□□□□ -0.88
SNRPN-206ENST00000553597 ARPP21Q9UBL0 812 aaPredicted RBP9.58□□□□□ -0.88
SNRPN-206ENST00000553597 RAD50Q92878 1312 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 AOC2O75106 756 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 PRDM1O75626 825 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 PTH1RQ03431 593 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 RRP1BQ14684 758 aaKnown RBP9.57□□□□□ -0.88
SNRPN-206ENST00000553597 DEFB115Q30KQ5 88 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 C12orf60Q5U649 245 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 RGMBQ6NW40 437 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.57□□□□□ -0.88
SNRPN-206ENST00000553597 RASAL3Q86YV0 1011 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 CLEC10AQ8IUN9 316 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 REM2Q8IYK8 340 aaPredicted RBP9.57□□□□□ -0.88
SNRPN-206ENST00000553597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNRPN-206ENST00000553597 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 CAPNS2Q96L46 248 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 ESYT1Q9BSJ8 1104 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 ANO2Q9NQ90 1003 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 SERPINB13Q9UIV8 391 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 LOC285556D6RIA3 1793 aa9.57□□□□□ -0.88
SNRPN-206ENST00000553597 SGSM2O43147 1006 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 SHMT1P34896 483 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 VEGFBP49765 207 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 FKBP1BP68106 108 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 JAG1P78504 1218 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 PPARAQ07869 468 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 RRP12Q5JTH9 1297 aaKnown RBP9.56□□□□□ -0.88
SNRPN-206ENST00000553597 ANKRD13AQ8IZ07 590 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 OPTNQ96CV9 577 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 SLC10A4Q96EP9 437 aa9.56□□□□□ -0.88
SNRPN-206ENST00000553597 ZIC5Q96T25 663 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms