RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 KDM5AP29375 1690 aaKnown RBP6.74□□□□□ -1.33
ATXN3-222ENST00000553570 E9PSI1 815 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 EIF1AYO14602 144 aaKnown RBP6.74□□□□□ -1.33
ATXN3-222ENST00000553570 MAPK8P45983 427 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 SPRED3Q2MJR0 410 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 PRSS36Q5K4E3 855 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 ACAD11Q709F0 780 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 ASAP3Q8TDY4 903 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 NRSN2Q9GZP1 204 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-222ENST00000553570 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-222ENST00000553570 ADGRB3O60242 1522 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 STRCP1A6NGW2 1772 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 RIMS2Q9UQ26 1411 aa6.74□□□□□ -1.33
ATXN3-222ENST00000553570 CHD2O14647 1828 aaKnown RBP6.73□□□□□ -1.33
ATXN3-222ENST00000553570 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 SCAF11Q99590 1463 aaKnown RBP6.73□□□□□ -1.33
ATXN3-222ENST00000553570 TMEM2Q9UHN6 1383 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 A0A096LPE4 126 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 C19orf57Q0VDD7 668 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 IKBKEQ14164 716 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 ARMC10Q8N2F6 343 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 SLC7A3Q8WY07 619 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 CSRNP1Q96S65 589 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 SETDB2Q96T68 719 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 WWC3Q9ULE0 1092 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 NEURL4Q96JN8 1562 aa6.73□□□□□ -1.33
ATXN3-222ENST00000553570 PPLO60437 1756 aa6.72□□□□□ -1.33
ATXN3-222ENST00000553570 FAM177BA6PVY3 158 aa6.72□□□□□ -1.33
ATXN3-222ENST00000553570 DLGAP3O95886 979 aa6.72□□□□□ -1.33
ATXN3-222ENST00000553570 NLRP12P59046 1061 aa6.72□□□□□ -1.33
ATXN3-222ENST00000553570 ENOX2Q16206 610 aaKnown RBP6.72□□□□□ -1.33
ATXN3-222ENST00000553570 ZNF423Q2M1K9 1284 aa6.72□□□□□ -1.33
ATXN3-222ENST00000553570 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
ATXN3-222ENST00000553570 MRRFQ96E11 262 aaKnown RBP6.72□□□□□ -1.33
ATXN3-222ENST00000553570 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
ATXN3-222ENST00000553570 XIRP1Q702N8 1843 aaKnown RBP6.71□□□□□ -1.33
ATXN3-222ENST00000553570 CCDC144AA2RUR9 1427 aa6.71□□□□□ -1.34
ATXN3-222ENST00000553570 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
ATXN3-222ENST00000553570 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
ATXN3-222ENST00000553570 LDHBP07195 334 aaKnown RBP6.71□□□□□ -1.34
ATXN3-222ENST00000553570 ITPKAP23677 461 aa6.71□□□□□ -1.34
ATXN3-222ENST00000553570 FBXO41Q8TF61 875 aa6.71□□□□□ -1.34
ATXN3-222ENST00000553570 ABCB6Q9NP58 842 aa6.71□□□□□ -1.34
ATXN3-222ENST00000553570 RNF19AQ9NV58 838 aa6.71□□□□□ -1.34
ATXN3-222ENST00000553570 SLIT1O75093 1534 aa6.71□□□□□ -1.34
ATXN3-222ENST00000553570 LOC100289279A0A1B0GTE1 492 aa6.7□□□□□ -1.34
ATXN3-222ENST00000553570 GLB1P16278 677 aa6.7□□□□□ -1.34
ATXN3-222ENST00000553570 ARL4DP49703 201 aa6.7□□□□□ -1.34
ATXN3-222ENST00000553570 PRPF40BQ6NWY9 871 aaKnown RBP6.7□□□□□ -1.34
ATXN3-222ENST00000553570 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
ATXN3-222ENST00000553570 TMPRSS13Q9BYE2 586 aa6.7□□□□□ -1.34
ATXN3-222ENST00000553570 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-222ENST00000553570 ZNF576Q9H609 170 aa6.7□□□□□ -1.34
ATXN3-222ENST00000553570 STK26Q9P289 416 aa6.7□□□□□ -1.34
ATXN3-222ENST00000553570 TRPM2O94759 1503 aa6.7□□□□□ -1.34
ATXN3-222ENST00000553570 MED14O60244 1454 aa6.69□□□□□ -1.34
ATXN3-222ENST00000553570 ARHGAP23Q9P227 1491 aa6.69□□□□□ -1.34
ATXN3-222ENST00000553570 TOM1O60784 492 aa6.69□□□□□ -1.34
ATXN3-222ENST00000553570 PRPF40AO75400 957 aaKnown RBP6.69□□□□□ -1.34
ATXN3-222ENST00000553570 KCNA6P17658 529 aa6.69□□□□□ -1.34
ATXN3-222ENST00000553570 PCDH1Q08174 1060 aa6.69□□□□□ -1.34
ATXN3-222ENST00000553570 DUSP9Q99956 384 aaKnown RBP6.69□□□□□ -1.34
ATXN3-222ENST00000553570 CEP41Q9BYV8 373 aa6.69□□□□□ -1.34
ATXN3-222ENST00000553570 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
ATXN3-222ENST00000553570 EHD4Q9H223 541 aa6.69□□□□□ -1.34
ATXN3-222ENST00000553570 CTSBP07858 339 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 PTPN12Q05209 780 aaKnown RBP6.68□□□□□ -1.34
ATXN3-222ENST00000553570 GRM2Q14416 872 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 UVSSAQ2YD98 709 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 PI16Q6UXB8 463 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 SIN3AQ96ST3 1273 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 PARP2Q9UGN5 583 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 TBX22Q9Y458 520 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 RPGRIP1LQ68CZ1 1315 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 LTBP4Q8N2S1 1624 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 PLEKHG1Q9ULL1 1385 aa6.68□□□□□ -1.34
ATXN3-222ENST00000553570 IFT172Q9UG01 1749 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 B3GALT4O96024 378 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 PREPP48147 710 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 ATP2B2Q01814 1243 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 GSTM4Q03013 218 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 ZMYM1Q5SVZ6 1142 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 ANKRD34AQ69YU3 496 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 ALG1LQ6GMV1 187 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 TMEM132EQ6IEE7 984 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 Q8N3U1 123 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 TRIM56Q9BRZ2 755 aaKnown RBP6.67□□□□□ -1.34
ATXN3-222ENST00000553570 RUSC1Q9BVN2 902 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
ATXN3-222ENST00000553570 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms