RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 EAF2Q96CJ1 260 aaPredicted RBP18.49■□□□□ 0.55
SDR39U1-205ENST00000553546 ZNF333Q96JL9 665 aa18.49■□□□□ 0.55
SDR39U1-205ENST00000553546 CCDC8Q9H0W5 538 aaPredicted RBP18.49■□□□□ 0.55
SDR39U1-205ENST00000553546 CHMP4BQ9H444 224 aaKnown RBP18.49■□□□□ 0.55
SDR39U1-205ENST00000553546 AATFQ9NY61 560 aaKnown RBP eCLIP18.49■□□□□ 0.55
SDR39U1-205ENST00000553546 COLQQ9Y215 455 aaPredicted RBP18.49■□□□□ 0.55
SDR39U1-205ENST00000553546 TRIOBPQ9H2D6 2365 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 HOXD10P28358 340 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 TMED8Q6PL24 325 aaPredicted RBP18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 GADL1Q6ZQY3 521 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 TMEM106CQ9BVX2 250 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 ARHGAP39Q9C0H5 1083 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 TLR7Q9NYK1 1049 aaKnown RBP18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 PI4KBQ9UBF8 816 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 EXOC6BQ9Y2D4 811 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 ZSWIM8A7E2V4 1837 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 FOCADQ5VW36 1801 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 ATAD5Q96QE3 1844 aa18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 MYO5AQ9Y4I1 1855 aaKnown RBP18.48■□□□□ 0.55
SDR39U1-205ENST00000553546 TRIM75PA6NK02 468 aa18.47■□□□□ 0.55
SDR39U1-205ENST00000553546 HMMRO75330 724 aa18.47■□□□□ 0.55
SDR39U1-205ENST00000553546 PSMC4P43686 418 aa18.47■□□□□ 0.55
SDR39U1-205ENST00000553546 CDK5RAP2Q96SN8 1893 aa18.47■□□□□ 0.55
SDR39U1-205ENST00000553546 FAM196BA6NMK8 535 aa18.46■□□□□ 0.55
SDR39U1-205ENST00000553546 SLURP2P0DP57 97 aa18.46■□□□□ 0.55
SDR39U1-205ENST00000553546 AACSQ86V21 672 aa18.46■□□□□ 0.55
SDR39U1-205ENST00000553546 RPAP2Q8IXW5 612 aaPredicted RBP18.46■□□□□ 0.55
SDR39U1-205ENST00000553546 PIH1D3Q9NQM4 214 aaKnown RBP18.46■□□□□ 0.55
SDR39U1-205ENST00000553546 SRRDQ9UH36 339 aa18.46■□□□□ 0.55
SDR39U1-205ENST00000553546 FLT1P17948 1338 aa18.46■□□□□ 0.55
SDR39U1-205ENST00000553546 IDH1O75874 414 aaKnown RBP18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 CYP2C8P10632 490 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 BCRP11274 1271 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 CAP2P40123 477 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 ADGRA1Q86SQ6 560 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 PROCA1Q8NCQ7 364 aaPredicted RBP18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 TGFBRAP1Q8WUH2 860 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 TRIM47Q96LD4 638 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 TRIM34Q9BYJ4 488 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 AS3MTQ9HBK9 375 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 PNMA3Q9UL41 463 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 AGTPBP1Q9UPW5 1226 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 CEP290O15078 2479 aa18.45■□□□□ 0.54
SDR39U1-205ENST00000553546 USP17L5A8MUK1 530 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 CYP7A1P22680 504 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 FCGRTP55899 365 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 MAP3K12Q12852 859 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 FOXP4Q8IVH2 680 aaPredicted RBP18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 MAPKAPK5Q8IW41 473 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 ZNF280CQ8ND82 737 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 RHPN1Q8TCX5 695 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 KIF1BPQ96EK5 621 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 RCAN3Q9UKA8 241 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
SDR39U1-205ENST00000553546 MGAMO43451 1857 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 LOC285556D6RIA3 1793 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 HLA-DOAP06340 250 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 OSBPP22059 807 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 SPP2Q13103 211 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 PABPC4Q13310 644 aaKnown RBP eCLIP18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 SLC4A8Q2Y0W8 1093 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 CRACR2BQ8N4Y2 399 aaPredicted RBP18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 RAET1EQ8TD07 263 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 GINM1Q9NU53 330 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 COG6Q9Y2V7 657 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 MYPNQ86TC9 1320 aa18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 RANBP2P49792 3224 aaKnown RBP18.43■□□□□ 0.54
SDR39U1-205ENST00000553546 ASNSP08243 561 aa18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 CTGFP29279 349 aa18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 TTF1Q15361 905 aaPredicted RBP18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 CCDC84Q86UT8 332 aaPredicted RBP18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 METTL16Q86W50 562 aaKnown RBP18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 MAGEB6Q8N7X4 407 aa18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 SH3TC2Q8TF17 1288 aa18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 IL1RAPL2Q9NP60 686 aa18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
SDR39U1-205ENST00000553546 ECM2O94769 699 aaPredicted RBP18.41■□□□□ 0.54
SDR39U1-205ENST00000553546 PALD1Q9ULE6 856 aa18.41■□□□□ 0.54
SDR39U1-205ENST00000553546 RAB11FIP3O75154 756 aa18.4■□□□□ 0.54
SDR39U1-205ENST00000553546 GRK4P32298 578 aa18.4■□□□□ 0.54
SDR39U1-205ENST00000553546 DYNLL1P63167 89 aaKnown RBP18.4■□□□□ 0.54
SDR39U1-205ENST00000553546 SH3D19Q5HYK7 790 aa18.4■□□□□ 0.54
SDR39U1-205ENST00000553546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.4■□□□□ 0.54
SDR39U1-205ENST00000553546 WDR18Q9BV38 432 aa18.4■□□□□ 0.54
SDR39U1-205ENST00000553546 MYH1P12882 1939 aa18.4■□□□□ 0.54
SDR39U1-205ENST00000553546 IFIT2P09913 472 aaKnown RBP18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 USP5P45974 858 aa18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 GCLCP48506 637 aaPredicted RBP18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 HMGCS2P54868 508 aa18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 RRP1BQ14684 758 aaKnown RBP18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 FAM110CQ1W6H9 321 aa18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 TREML2Q5T2D2 321 aa18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 MIGA1Q8NAN2 632 aa18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 ANTXR1Q9H6X2 564 aa18.39■□□□□ 0.53
SDR39U1-205ENST00000553546 DNAJC18Q9H819 358 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms