RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 SOCS4Q8WXH5 440 aa8.53□□□□□ -1.04
LETMD1-236ENST00000553043 TRIM43Q96BQ3 446 aaPredicted RBP8.53□□□□□ -1.04
LETMD1-236ENST00000553043 ASCC2Q9H1I8 757 aaPredicted RBP8.53□□□□□ -1.04
LETMD1-236ENST00000553043 IFT57Q9NWB7 429 aa8.53□□□□□ -1.04
LETMD1-236ENST00000553043 MAST3O60307 1309 aa8.53□□□□□ -1.04
LETMD1-236ENST00000553043 DOCK3Q8IZD9 2030 aa8.53□□□□□ -1.04
LETMD1-236ENST00000553043 FAM86C2PA6NEL3 165 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 DNM1LO00429 736 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 MYCNP04198 464 aaPredicted RBP8.52□□□□□ -1.05
LETMD1-236ENST00000553043 ITGB8P26012 769 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 GNAI1P63096 354 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 FOXO4P98177 505 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 TFF2Q03403 129 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 ADGRE1Q14246 886 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.05
LETMD1-236ENST00000553043 CCDC57Q2TAC2 916 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 TRIM60Q495X7 471 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 GJC2Q5T442 439 aaPredicted RBP8.52□□□□□ -1.05
LETMD1-236ENST00000553043 FBXO33Q7Z6M2 555 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 C8orf58Q8NAV2 365 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 P2RX7Q99572 595 aaKnown RBP8.52□□□□□ -1.05
LETMD1-236ENST00000553043 PDLIM7Q9NR12 457 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 DDX20Q9UHI6 824 aaKnown RBP8.52□□□□□ -1.05
LETMD1-236ENST00000553043 MUC6Q6W4X9 2439 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 CACNA1FO60840 1977 aa8.52□□□□□ -1.05
LETMD1-236ENST00000553043 CTNND1O60716 968 aaKnown RBP8.51□□□□□ -1.05
LETMD1-236ENST00000553043 RGS2P41220 211 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 KCNQ1P51787 676 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 HMGCS2P54868 508 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 SPP2Q13103 211 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 PABPC4Q13310 644 aaKnown RBP eCLIP8.51□□□□□ -1.054e-7■■■■□ 24.1
LETMD1-236ENST00000553043 DIXDC1Q155Q3 683 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 LMBR1LQ6UX01 489 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 CCDC129Q6ZRS4 1044 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 ZSCAN29Q8IWY8 852 aaPredicted RBP8.51□□□□□ -1.05
LETMD1-236ENST00000553043 CCAR1Q8IX12 1150 aaKnown RBP8.51□□□□□ -1.05
LETMD1-236ENST00000553043 PROCA1Q8NCQ7 364 aaPredicted RBP8.51□□□□□ -1.05
LETMD1-236ENST00000553043 LPAR1Q92633 364 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 MYH16Q9H6N6 1097 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 USP40Q9NVE5 1235 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 MORF4L1Q9UBU8 362 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 DAGLAQ9Y4D2 1042 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 BDP1A6H8Y1 2624 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 IL16Q14005 1332 aa8.51□□□□□ -1.05
LETMD1-236ENST00000553043 GRXCR1A8MXD5 290 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 GPR37L1O60883 481 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 ATXN8OSP0DMR3 200 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 ZEB1P37275 1124 aaPredicted RBP8.5□□□□□ -1.05
LETMD1-236ENST00000553043 PBX2P40425 430 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 CAVIN4Q5BKX8 364 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 EPHA10Q5JZY3 1008 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 MFSD14CQ5VZR4 134 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 G2E3Q7L622 706 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 MICALL1Q8N3F8 863 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 GPRC5AQ8NFJ5 357 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 USP6NLQ92738 828 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 FERMT2Q96AC1 680 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 PUS3Q9BZE2 481 aaKnown RBP8.5□□□□□ -1.05
LETMD1-236ENST00000553043 TSPYL2Q9H2G4 693 aaPredicted RBP8.5□□□□□ -1.05
LETMD1-236ENST00000553043 TXNRD2Q9NNW7 524 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 C11orf16Q9NQ32 467 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 CXXC1Q9P0U4 656 aaPredicted RBP8.5□□□□□ -1.05
LETMD1-236ENST00000553043 SUGT1Q9Y2Z0 365 aa8.5□□□□□ -1.05
LETMD1-236ENST00000553043 ATRNL1Q5VV63 1379 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 MSCO60682 206 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 MAPK4P31152 587 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 RGS3P49796 1198 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 IRX3P78415 501 aaPredicted RBP8.49□□□□□ -1.05
LETMD1-236ENST00000553043 FPGSQ05932 587 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 NBR1Q14596 966 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 SKIV2LQ15477 1246 aaKnown RBP8.49□□□□□ -1.05
LETMD1-236ENST00000553043 Q3C1V9 767 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 MORN1Q5T089 497 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 ANO1Q5XXA6 986 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 SH3BP5LQ7L8J4 393 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 GPR142Q7Z601 462 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 TSPYL6Q8N831 410 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 ZNF280CQ8ND82 737 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 APBA2Q99767 749 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 STK31Q9BXU1 1019 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 PBX4Q9BYU1 374 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 PORCNQ9H237 461 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 CWC22Q9HCG8 908 aaKnown RBP8.49□□□□□ -1.05
LETMD1-236ENST00000553043 SPINK5Q9NQ38 1064 aaPredicted RBP8.49□□□□□ -1.05
LETMD1-236ENST00000553043 FLRT1Q9NZU1 646 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 ADAMTS8Q9UP79 889 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 NDUFB9Q9Y6M9 179 aa8.49□□□□□ -1.05
LETMD1-236ENST00000553043 LAMA2P24043 3122 aaKnown RBP8.49□□□□□ -1.05
LETMD1-236ENST00000553043 DDTLA6NHG4 134 aaPredicted RBP8.48□□□□□ -1.05
LETMD1-236ENST00000553043 KBTBD13C9JR72 458 aa8.48□□□□□ -1.05
LETMD1-236ENST00000553043 RAG1P15918 1043 aa8.48□□□□□ -1.05
LETMD1-236ENST00000553043 CYP2C19P33261 490 aa8.48□□□□□ -1.05
LETMD1-236ENST00000553043 ADCYAP1R1P41586 468 aa8.48□□□□□ -1.05
LETMD1-236ENST00000553043 TLE2Q04725 743 aa8.48□□□□□ -1.05
LETMD1-236ENST00000553043 DDX10Q13206 875 aaKnown RBP8.48□□□□□ -1.05
LETMD1-236ENST00000553043 AAK1Q2M2I8 961 aa8.48□□□□□ -1.05
LETMD1-236ENST00000553043 PLEKHH3Q7Z736 793 aa8.48□□□□□ -1.05
LETMD1-236ENST00000553043 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
LETMD1-236ENST00000553043 LINS1Q8NG48 757 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms