RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 MYSM1Q5VVJ2 828 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 PPP2R2DQ66LE6 453 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 PIP4P2Q8N4L2 257 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 ANKRD13CQ8N6S4 541 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 USP38Q8NB14 1042 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 MYD88Q99836 296 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 EPHX3Q9H6B9 360 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 PICK1Q9NRD5 415 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 BMP2KQ9NSY1 1161 aaPredicted RBP6.61□□□□□ -1.35
CKAP4-203ENST00000553039 ZNF112Q9UJU3 913 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 GJD2Q9UKL4 321 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 BOLA1Q9Y3E2 137 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 ZHX2Q9Y6X8 837 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 VCANP13611 3396 aa6.61□□□□□ -1.35
CKAP4-203ENST00000553039 MAPK8IP3Q9UPT6 1336 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 LRRC37AA6NMS7 1700 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 MSCO60682 206 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 INPP5BP32019 993 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 RIPK4P57078 832 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 CHRNDQ07001 517 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 PABPC4Q13310 644 aaKnown RBP eCLIP6.6□□□□□ -1.35
CKAP4-203ENST00000553039 MOGSQ13724 837 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 DIXDC1Q155Q3 683 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 FAM110CQ1W6H9 321 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 C9orf50Q5SZB4 431 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 MAP3K21Q5TCX8 1036 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 GADL1Q6ZQY3 521 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 CCAR1Q8IX12 1150 aaKnown RBP6.6□□□□□ -1.35
CKAP4-203ENST00000553039 ARRDC4Q8NCT1 418 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 JARID2Q92833 1246 aaPredicted RBP6.6□□□□□ -1.35
CKAP4-203ENST00000553039 BADQ92934 168 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 TEKT1Q969V4 418 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 RNPC3Q96LT9 517 aaKnown RBP6.6□□□□□ -1.35
CKAP4-203ENST00000553039 NUDT12Q9BQG2 462 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 KCNH6Q9H252 994 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 GREM2Q9H772 168 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 CXXC1Q9P0U4 656 aaPredicted RBP6.6□□□□□ -1.35
CKAP4-203ENST00000553039 TRIM35Q9UPQ4 493 aa6.6□□□□□ -1.35
CKAP4-203ENST00000553039 A0A0G2JLL6 359 aaPredicted RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 CYP2B6P20813 491 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 IGFBP4P22692 258 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 KLRK1P26718 216 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 RFC5P40937 340 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 CLK2P49760 499 aaKnown RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 ATN1P54259 1190 aaPredicted RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 MFAP1P55081 439 aaKnown RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 NEXNQ0ZGT2 675 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 CCDC85BQ15834 202 aaPredicted RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 NOL9Q5SY16 702 aaKnown RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 LHX8Q68G74 356 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 PRRT2Q7Z6L0 340 aaPredicted RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 CDAN1Q8IWY9 1227 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 TDRD7Q8NHU6 1098 aaKnown RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 TBC1D22AQ8WUA7 517 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 FAM151AQ8WW52 585 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 TIFAQ96CG3 184 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 EPAS1Q99814 870 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 METTL22Q9BUU2 404 aaPredicted RBP6.59□□□□□ -1.35
CKAP4-203ENST00000553039 TACC3Q9Y6A5 838 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 MUC6Q6W4X9 2439 aa6.59□□□□□ -1.35
CKAP4-203ENST00000553039 COL2A1P02458 1487 aaPredicted RBP6.59□□□□□ -1.36
CKAP4-203ENST00000553039 CACNA1AO00555 2505 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 AOX1Q06278 1338 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 ANKRD18BA2A2Z9 1011 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 CHL1O00533 1208 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 TAF5LO75529 589 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 OATP04181 439 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 ZKSCAN1P17029 563 aaPredicted RBP6.58□□□□□ -1.36
CKAP4-203ENST00000553039 ITGA6P23229 1130 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 DNAJB2P25686 324 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 HIBADHP31937 336 aaKnown RBP6.58□□□□□ -1.36
CKAP4-203ENST00000553039 RTP1P59025 263 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 CACNB2Q08289 660 aaPredicted RBP6.58□□□□□ -1.36
CKAP4-203ENST00000553039 TRIM32Q13049 653 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 TUSC1Q2TAM9 212 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 MFSD14CQ5VZR4 134 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 CCDC174Q6PII3 467 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 POTEEQ6S8J3 1075 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 PTCD2Q8WV60 388 aaKnown RBP6.58□□□□□ -1.36
CKAP4-203ENST00000553039 ZDHHC15Q96MV8 337 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 GZF1Q9H116 711 aaPredicted RBP6.58□□□□□ -1.36
CKAP4-203ENST00000553039 PRDM5Q9NQX1 630 aaPredicted RBP6.58□□□□□ -1.36
CKAP4-203ENST00000553039 SNRKQ9NRH2 765 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 POLR3EQ9NVU0 708 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 MTMR7Q9Y216 660 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 JAG2Q9Y219 1238 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 ATP11BQ9Y2G3 1177 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 AFG3L2Q9Y4W6 797 aa6.58□□□□□ -1.36
CKAP4-203ENST00000553039 MYBBP1AQ9BQG0 1328 aaKnown RBP6.57□□□□□ -1.36
CKAP4-203ENST00000553039 BDP1A6H8Y1 2624 aa6.57□□□□□ -1.36
CKAP4-203ENST00000553039 PRR33A8MZF0 331 aa6.57□□□□□ -1.36
CKAP4-203ENST00000553039 DNM1LO00429 736 aa6.57□□□□□ -1.36
CKAP4-203ENST00000553039 FRAT2O75474 233 aaPredicted RBP6.57□□□□□ -1.36
CKAP4-203ENST00000553039 PTPRAP18433 802 aa6.57□□□□□ -1.36
CKAP4-203ENST00000553039 IRX5P78411 483 aaPredicted RBP6.57□□□□□ -1.36
CKAP4-203ENST00000553039 HHIPL2Q6UWX4 724 aa6.57□□□□□ -1.36
CKAP4-203ENST00000553039 SLC39A5Q6ZMH5 540 aa6.57□□□□□ -1.36
CKAP4-203ENST00000553039 CCDC129Q6ZRS4 1044 aa6.57□□□□□ -1.36
CKAP4-203ENST00000553039 METTL3Q86U44 580 aaKnown RBP6.57□□□□□ -1.36
CKAP4-203ENST00000553039 VPS37DQ86XT2 251 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms