RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 SIPA1L1O43166 1804 aa11.9□□□□□ -0.51
LETMD1-234ENST00000552645 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
LETMD1-234ENST00000552645 CWC27Q6UX04 472 aaKnown RBP11.89□□□□□ -0.51
LETMD1-234ENST00000552645 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
LETMD1-234ENST00000552645 CAPNS2Q96L46 248 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 DHX36Q9H2U1 1008 aaKnown RBP11.89□□□□□ -0.51
LETMD1-234ENST00000552645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.89□□□□□ -0.51
LETMD1-234ENST00000552645 DCP1AQ9NPI6 582 aaPredicted RBP11.89□□□□□ -0.51
LETMD1-234ENST00000552645 PI4KBQ9UBF8 816 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 CSADQ9Y600 493 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 ATRNL1Q5VV63 1379 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 VEGFBP49765 207 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 AMOTL1Q8IY63 956 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 ANKRD13AQ8IZ07 590 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 SLC10A4Q96EP9 437 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 ELP3Q9H9T3 547 aa11.89□□□□□ -0.51
LETMD1-234ENST00000552645 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
LETMD1-234ENST00000552645 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
LETMD1-234ENST00000552645 HIP1O00291 1037 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 CYP2D6P10635 497 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 GNAT2P19087 354 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 INPP5BP32019 993 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 ECE1P42892 770 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 TDO2P48775 406 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 VGLL4Q14135 290 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 TTC6Q86TZ1 520 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 STK11IPQ8N1F8 1099 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 HELLSQ9NRZ9 838 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 ATP8A2Q9NTI2 1148 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 ATAD5Q96QE3 1844 aa11.88□□□□□ -0.51
LETMD1-234ENST00000552645 WDR33Q9C0J8 1336 aaKnown RBP11.88□□□□□ -0.51
LETMD1-234ENST00000552645 COL2A1P02458 1487 aaPredicted RBP11.88□□□□□ -0.51
LETMD1-234ENST00000552645 CYP2D7A0A087X1C5 515 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 MINDY4BA8MYZ0 360 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 USP17L12C9JPN9 530 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 USP17L21D6R901 530 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 AOC2O75106 756 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 CLCN1P35523 988 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 PLCD1P51178 756 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 EVX2Q03828 476 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 HSP90AA2PQ14568 343 aaPredicted RBP11.87□□□□□ -0.51
LETMD1-234ENST00000552645 MAP3K11Q16584 847 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 LDLRAD1Q5T700 205 aa11.87□□□□□ -0.51
LETMD1-234ENST00000552645 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.87□□□□□ -0.51
LETMD1-234ENST00000552645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.87□□□□□ -0.51
LETMD1-234ENST00000552645 GSG1L2A8MUP6 293 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 PATL2C9JE40 543 aaKnown RBP11.86□□□□□ -0.51
LETMD1-234ENST00000552645 VPS53Q5VIR6 699 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 ZNF589Q86UQ0 364 aaPredicted RBP11.86□□□□□ -0.51
LETMD1-234ENST00000552645 RASAL3Q86YV0 1011 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 DNAJC5GQ8N7S2 189 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 CCDC102AQ96A19 550 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 HHIPL1Q96JK4 782 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 NACAP1Q9BZK3 213 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 NAPBQ9H115 298 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 HERC5Q9UII4 1024 aaKnown RBP11.86□□□□□ -0.51
LETMD1-234ENST00000552645 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 DOCK1Q14185 1865 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 LAMB1P07942 1786 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
LETMD1-234ENST00000552645 CTR9Q6PD62 1173 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 FOXP4Q8IVH2 680 aaPredicted RBP11.86□□□□□ -0.51
LETMD1-234ENST00000552645 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 OPTNQ96CV9 577 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 EPB41L4AQ9HCS5 686 aaPredicted RBP11.86□□□□□ -0.51
LETMD1-234ENST00000552645 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
LETMD1-234ENST00000552645 CCDC171Q6TFL3 1326 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 PHF20L1A8MW92 1017 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 SMIM22K7EJ46 135 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 TBC1D12O60347 775 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 SLC10A3P09131 477 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
LETMD1-234ENST00000552645 TICAM2Q86XR7 235 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 IFNL3Q8IZI9 196 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 DNAJC18Q9H819 358 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.85□□□□□ -0.51
LETMD1-234ENST00000552645 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
LETMD1-234ENST00000552645 SNCAIPQ9Y6H5 919 aa11.85□□□□□ -0.51
LETMD1-234ENST00000552645 FAM155AB1AL88 458 aaPredicted RBP11.84□□□□□ -0.51
LETMD1-234ENST00000552645 GDF11O95390 407 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 CHMLP26374 656 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 NOGQ13253 232 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 BMP2KLQ5H9B9 411 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 SLC44A5Q8NCS7 719 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 WNK4Q96J92 1243 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 ZIC5Q96T25 663 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 ZNF112Q9UJU3 913 aa11.84□□□□□ -0.51
LETMD1-234ENST00000552645 MPHOSPH10O00566 681 aaKnown RBP11.83□□□□□ -0.52
LETMD1-234ENST00000552645 CTNND1O60716 968 aaKnown RBP11.83□□□□□ -0.52
LETMD1-234ENST00000552645 HSPD1P10809 573 aaKnown RBP11.83□□□□□ -0.52
LETMD1-234ENST00000552645 MAP3K10Q02779 954 aa11.83□□□□□ -0.52
LETMD1-234ENST00000552645 SHROOM1Q2M3G4 852 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms