RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 MSX1P28360 303 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 EIF4A1P60842 406 aaKnown RBP7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 PKP1Q13835 747 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 UVSSAQ2YD98 709 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 AMOTQ4VCS5 1084 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 PLEKHO1Q53GL0 409 aaPredicted RBP7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 KIAA1211Q6ZU35 1233 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 PPP1R42Q7Z4L9 355 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 CNTROBQ8N137 903 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 KCNH5Q8NCM2 988 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 C7orf43Q8WVR3 580 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 RUFY2Q8WXA3 655 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 HSH2DQ96JZ2 352 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 RBSNQ9H1K0 784 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 XRN1Q8IZH2 1706 aaKnown RBP7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 TTC41PQ6P2S7 1318 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 CEMIPQ8WUJ3 1361 aa7.17□□□□□ -1.26
CHMP4A-210ENST00000552620 N4BP2Q86UW6 1770 aaPredicted RBP7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 SGSM2O43147 1006 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 ZNF500O60304 480 aaPredicted RBP7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 GLRX3O76003 335 aaKnown RBP7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 RHOQP17081 205 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 MTX1Q13505 466 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 AKAP4Q5JQC9 854 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 BEND3Q5T5X7 828 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 LRRC69Q6ZNQ3 347 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 BTLAQ7Z6A9 289 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 ERC1Q8IUD2 1116 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 FAM184AQ8NB25 1140 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 TMEM87AQ8NBN3 555 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 ZNF280CQ8ND82 737 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 FBF1Q8TES7 1133 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 DNAAF4Q8WXU2 420 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 GPATCH3Q96I76 525 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 ZSCAN31Q96LW9 406 aaPredicted RBP7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 ZIC5Q96T25 663 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 DUSP9Q99956 384 aaKnown RBP7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 CCDC39Q9UFE4 941 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 PALD1Q9ULE6 856 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 NOL7Q9UMY1 257 aaKnown RBP7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 ERBB4Q15303 1308 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 NWD1Q149M9 1564 aa7.16□□□□□ -1.26
CHMP4A-210ENST00000552620 KIF13AQ9H1H9 1805 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 HIP1O00291 1037 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 SRGAP3O43295 1099 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 RRP9O43818 475 aaKnown RBP7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 RECKO95980 971 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 CEBPAP49715 358 aaPredicted RBP7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 PSMD2Q13200 908 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 TSNAXIP1Q2TAA8 658 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 PGBD3Q8N328 593 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 PI4K2BQ8TCG2 481 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 KCNB2Q92953 911 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 CSRNP1Q96S65 589 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 TM6SF1Q9BZW5 370 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 DNAJC25Q9H1X3 360 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 TSPY26PQ9H489 355 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 TMEM63CQ9P1W3 806 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 DBF4Q9UBU7 674 aaPredicted RBP7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 PARP2Q9UGN5 583 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 DMGDHQ9UI17 866 aaKnown RBP7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 DACH1Q9UI36 760 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 LIMCH1Q9UPQ0 1083 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 ATP6V1DQ9Y5K8 247 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 SOS2Q07890 1332 aaPredicted RBP7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 RAD50Q92878 1312 aa7.15□□□□□ -1.26
CHMP4A-210ENST00000552620 PIK3C2AO00443 1686 aa7.15□□□□□ -1.27
CHMP4A-210ENST00000552620 TUBGCP6Q96RT7 1819 aa7.15□□□□□ -1.27
CHMP4A-210ENST00000552620 OVOS2A0A0G2JMS6 1433 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 A0A1W2PNR3 127 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 FIGNL2A6NMB9 653 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 POTECB2RU33 542 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 OPLAHO14841 1288 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 SORBS3O60504 671 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 BMP1P13497 986 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 KCNA6P17658 529 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 INPP5BP32019 993 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 TEFQ10587 303 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 MRPL58Q14197 206 aaKnown RBP7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 AK9Q5TCS8 1911 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 TSHZ3Q63HK5 1081 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 TMC4Q7Z404 712 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 UNC5CLQ8IV45 518 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 CLASRPQ8N2M8 674 aaKnown RBP7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 LTV1Q96GA3 475 aaPredicted RBP7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 TTC14Q96N46 770 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 FRMD6Q96NE9 622 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 LSG1Q9H089 658 aaKnown RBP7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 PHAXQ9H814 394 aaKnown RBP7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 IL1RAPL2Q9NP60 686 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 SH2B1Q9NRF2 756 aaPredicted RBP7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 FAM208AQ9UK61 1670 aaKnown RBP7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 RTCBQ9Y3I0 505 aaKnown RBP7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 SNX14Q9Y5W7 946 aa7.14□□□□□ -1.27
CHMP4A-210ENST00000552620 NCAPD2Q15021 1401 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 SYCE3A1L190 88 aa7.13□□□□□ -1.27
CHMP4A-210ENST00000552620 PI4KAP2A4QPH2 592 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms