RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 TCP10L2B9ZVM9 353 aa12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 IL6STP40189 918 aaPredicted RBP12.3□□□□□ -0.44
TGFBR1-209ENST00000552516 SMIM22K7EJ46 135 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 FAM160A1Q05DH4 1040 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 PSMB7Q99436 277 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 ZNHIT6Q9NWK9 470 aaKnown RBP12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 AOX1Q06278 1338 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 IQSEC2Q5JU85 1478 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 PDCL2Q8N4E4 241 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 ZNF287Q9HBT7 754 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 USP31Q70CQ4 1352 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 SOS2Q07890 1332 aaPredicted RBP12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 PFKFB1P16118 471 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 ITPK1Q13572 414 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 SYT10Q6XYQ8 523 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 GOLGA6L1Q8N7Z2 621 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 DSCC1Q9BVC3 393 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 PXDNQ92626 1479 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 MROH5Q6ZUA9 1318 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 INF2Q27J81 1249 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 C11orf57Q6ZUT1 292 aaPredicted RBP12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 CACNA2D4Q7Z3S7 1137 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 PDCL3Q9H2J4 239 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 APOA5Q6Q788 366 aa12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 KRI1Q8N9T8 703 aaKnown RBP12.29□□□□□ -0.44
TGFBR1-209ENST00000552516 NRKQ7Z2Y5 1582 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 ZNF804BA4D1E1 1349 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 NEDD4P46934 1319 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 ADD2P35612 726 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 RNASE9P60153 205 aaKnown RBP12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 CTNND2Q9UQB3 1225 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 CLCN1P35523 988 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 ADKP55263 362 aaKnown RBP12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 DACH1Q9UI36 760 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 PLEKHA8P1O95397 391 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 SNW1Q13573 536 aaKnown RBP12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 LMTK2Q8IWU2 1503 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 USP17L2Q6R6M4 530 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 FANCBQ8NB91 859 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 USP40Q9NVE5 1235 aa12.28□□□□□ -0.44
TGFBR1-209ENST00000552516 BTDP43251 543 aa12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 CEP135Q66GS9 1140 aa12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 CCDC174Q6PII3 467 aa12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 RGS12O14924 1447 aa12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 GDF11O95390 407 aa12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 SSR1P43307 286 aaKnown RBP12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 UBXN4Q92575 508 aa12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 KIF24Q5T7B8 1368 aa12.27□□□□□ -0.44
TGFBR1-209ENST00000552516 SETBP1Q9Y6X0 1596 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 RAD17O75943 681 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 SERPINB2P05120 415 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 DPCR1Q3MIW9 517 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 CCDC40Q4G0X9 1142 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 CAPZA3Q96KX2 299 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 DESI2Q9BSY9 194 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 CTAGE5O15320 804 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 CBFA2T2O43439 604 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 CCDC12Q8WUD4 166 aaPredicted RBP12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 PYCARDQ9ULZ3 195 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 PREX1Q8TCU6 1659 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 MECOMQ03112 1051 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 CLSTN2Q9H4D0 955 aa12.27□□□□□ -0.45
TGFBR1-209ENST00000552516 PFKFB2O60825 505 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 KCTD1Q719H9 257 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 PARP1P09874 1014 aaKnown RBP12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 GUCY1A2P33402 732 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 NELFCDQ8IXH7 590 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 MROH1Q8NDA8 1641 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 MIGA2Q7L4E1 593 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 EYA3Q99504 573 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 TM6SF1Q9BZW5 370 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 CDC27P30260 824 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 ZNF445P59923 1031 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 PNMA1Q8ND90 353 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 KIF18AQ8NI77 898 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 XPO4Q9C0E2 1151 aaKnown RBP12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 ANKRD2Q9GZV1 360 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 ZHX1Q9UKY1 873 aaPredicted RBP12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 MACROD2A1Z1Q3 448 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 CUL4AQ13619 759 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 LARGE2Q8N3Y3 721 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
TGFBR1-209ENST00000552516 FAM205CA6NFA0 338 aa12.25□□□□□ -0.45
TGFBR1-209ENST00000552516 RBM17Q96I25 401 aaKnown RBP12.25□□□□□ -0.45
TGFBR1-209ENST00000552516 NFE2L3Q9Y4A8 694 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms