RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 NKPD1Q17RQ9 610 aa7.24□□□□□ -1.25
USP44-207ENST00000552237 PHLDB3Q6NSJ2 640 aa7.24□□□□□ -1.25
USP44-207ENST00000552237 CDC37L1Q7L3B6 337 aa7.24□□□□□ -1.25
USP44-207ENST00000552237 FAM155AB1AL88 458 aaPredicted RBP7.23□□□□□ -1.25
USP44-207ENST00000552237 NPIPB6E9PJ23 425 aa7.23□□□□□ -1.25
USP44-207ENST00000552237 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
USP44-207ENST00000552237 CIAPIN1Q6FI81 312 aa7.23□□□□□ -1.25
USP44-207ENST00000552237 TTLL10Q6ZVT0 673 aa7.23□□□□□ -1.25
USP44-207ENST00000552237 GPBAR1Q8TDU6 330 aa7.23□□□□□ -1.25
USP44-207ENST00000552237 FAM129BQ96TA1 746 aa7.23□□□□□ -1.25
USP44-207ENST00000552237 RAPGEFL1Q9UHV5 662 aa7.23□□□□□ -1.25
USP44-207ENST00000552237 CSADQ9Y600 493 aa7.23□□□□□ -1.25
USP44-207ENST00000552237 ARNTP27540 789 aa7.22□□□□□ -1.25
USP44-207ENST00000552237 BUD31P41223 144 aaPredicted RBP7.22□□□□□ -1.25
USP44-207ENST00000552237 PPM1JQ5JR12 505 aa7.22□□□□□ -1.25
USP44-207ENST00000552237 FAM214BQ7L5A3 538 aa7.22□□□□□ -1.25
USP44-207ENST00000552237 CCDC120Q96HB5 630 aa7.22□□□□□ -1.25
USP44-207ENST00000552237 NIF3L1Q9GZT8 377 aa7.22□□□□□ -1.25
USP44-207ENST00000552237 NLRP2Q9NX02 1062 aa7.22□□□□□ -1.25
USP44-207ENST00000552237 MAPK8IP1Q9UQF2 711 aa7.22□□□□□ -1.25
USP44-207ENST00000552237 TCAF2A6NFQ2 919 aa7.21□□□□□ -1.26
USP44-207ENST00000552237 PPP1R15AO75807 674 aaPredicted RBP7.21□□□□□ -1.26
USP44-207ENST00000552237 INHBBP09529 407 aa7.21□□□□□ -1.26
USP44-207ENST00000552237 GDNFP39905 211 aa7.21□□□□□ -1.26
USP44-207ENST00000552237 NPAS4Q8IUM7 802 aa7.21□□□□□ -1.26
USP44-207ENST00000552237 EPS8L3Q8TE67 593 aaKnown RBP7.21□□□□□ -1.26
USP44-207ENST00000552237 EPB41L4BQ9H329 900 aa7.21□□□□□ -1.26
USP44-207ENST00000552237 DCP1AQ9NPI6 582 aaPredicted RBP7.21□□□□□ -1.26
USP44-207ENST00000552237 AKAP2Q9Y2D5 859 aa7.21□□□□□ -1.26
USP44-207ENST00000552237 ARID3CA6NKF2 412 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 XRCC5P13010 732 aaKnown RBP7.2□□□□□ -1.26
USP44-207ENST00000552237 NME2P22392 152 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 KCNA10Q16322 511 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 CDKAL1Q5VV42 579 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 B4GALNT3Q6L9W6 998 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 STK35Q8TDR2 534 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 HSPA12BQ96MM6 686 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 CITED4Q96RK1 184 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 ATP13A1Q9HD20 1204 aa7.2□□□□□ -1.26
USP44-207ENST00000552237 TPX2Q9ULW0 747 aaKnown RBP7.2□□□□□ -1.26
USP44-207ENST00000552237 CARNS1A5YM72 827 aa7.19□□□□□ -1.26
USP44-207ENST00000552237 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
USP44-207ENST00000552237 RAC2P15153 192 aa7.19□□□□□ -1.26
USP44-207ENST00000552237 CTSWP56202 376 aa7.19□□□□□ -1.26
USP44-207ENST00000552237 ATG14Q6ZNE5 492 aa7.19□□□□□ -1.26
USP44-207ENST00000552237 ERICH6Q7L0X2 663 aa7.19□□□□□ -1.26
USP44-207ENST00000552237 KCT2Q8NC54 265 aa7.19□□□□□ -1.26
USP44-207ENST00000552237 CSRNP1Q96S65 589 aa7.19□□□□□ -1.26
USP44-207ENST00000552237 H3BS24 57 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 GPR182O15218 404 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 EOMESO95936 686 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 KRT1P04264 644 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 SERPINB4P48594 390 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 ARMCX6Q7L4S7 300 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 AMIGO3Q86WK7 504 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 C12orf40Q86WS4 652 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 MFSD4AQ8N468 514 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 TIMELESSQ9UNS1 1208 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 SAMM50Q9Y512 469 aa7.18□□□□□ -1.26
USP44-207ENST00000552237 FANCGO15287 622 aa7.17□□□□□ -1.26
USP44-207ENST00000552237 NUAK1O60285 661 aa7.17□□□□□ -1.26
USP44-207ENST00000552237 ARHGAP4P98171 946 aa7.17□□□□□ -1.26
USP44-207ENST00000552237 UBE3DQ7Z6J8 389 aa7.17□□□□□ -1.26
USP44-207ENST00000552237 ABHD4Q8TB40 342 aa7.17□□□□□ -1.26
USP44-207ENST00000552237 CD320Q9NPF0 282 aa7.17□□□□□ -1.26
USP44-207ENST00000552237 C19orf73Q9NVV2 129 aa7.17□□□□□ -1.26
USP44-207ENST00000552237 ZNF252P-AS1Q0IIN9 211 aa7.16□□□□□ -1.26
USP44-207ENST00000552237 SFRP5Q5T4F7 317 aa7.16□□□□□ -1.26
USP44-207ENST00000552237 ZBTB37Q5TC79 503 aa7.16□□□□□ -1.26
USP44-207ENST00000552237 ELMO3Q96BJ8 720 aa7.16□□□□□ -1.26
USP44-207ENST00000552237 ALPK1Q96QP1 1244 aa7.16□□□□□ -1.26
USP44-207ENST00000552237 BCO2Q9BYV7 579 aa7.16□□□□□ -1.26
USP44-207ENST00000552237 SEMA3GQ9NS98 782 aa7.16□□□□□ -1.26
USP44-207ENST00000552237 LRIG2O94898 1065 aa7.15□□□□□ -1.26
USP44-207ENST00000552237 NTF4P34130 210 aa7.15□□□□□ -1.26
USP44-207ENST00000552237 DMRTB1Q96MA1 342 aa7.15□□□□□ -1.26
USP44-207ENST00000552237 SLAMF8Q9P0V8 285 aa7.15□□□□□ -1.26
USP44-207ENST00000552237 PCDHA4Q9UN74 947 aa7.15□□□□□ -1.26
USP44-207ENST00000552237 TRIM37O94972 964 aa7.14□□□□□ -1.27
USP44-207ENST00000552237 FGD1P98174 961 aa7.14□□□□□ -1.27
USP44-207ENST00000552237 PI16Q6UXB8 463 aa7.14□□□□□ -1.27
USP44-207ENST00000552237 MPRIPQ6WCQ1 1025 aa7.14□□□□□ -1.27
USP44-207ENST00000552237 TTC6Q86TZ1 520 aa7.14□□□□□ -1.27
USP44-207ENST00000552237 MIPEPQ99797 713 aa7.14□□□□□ -1.27
USP44-207ENST00000552237 KCNK12Q9HB15 430 aa7.14□□□□□ -1.27
USP44-207ENST00000552237 PRR33A8MZF0 331 aa7.13□□□□□ -1.27
USP44-207ENST00000552237 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
USP44-207ENST00000552237 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
USP44-207ENST00000552237 GLDCP23378 1020 aa7.13□□□□□ -1.27
USP44-207ENST00000552237 CCDC82Q8N4S0 544 aa7.13□□□□□ -1.27
USP44-207ENST00000552237 ZNF507Q8TCN5 953 aa7.13□□□□□ -1.27
USP44-207ENST00000552237 KCNN1Q92952 543 aa7.13□□□□□ -1.27
USP44-207ENST00000552237 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
USP44-207ENST00000552237 SMG5Q9UPR3 1016 aaKnown RBP7.13□□□□□ -1.27
USP44-207ENST00000552237 PRAMEF27A3QJZ7 478 aa7.12□□□□□ -1.27
USP44-207ENST00000552237 SLITRK5O94991 958 aa7.12□□□□□ -1.27
USP44-207ENST00000552237 LINC00310P59036 64 aa7.12□□□□□ -1.27
USP44-207ENST00000552237 ZNF746Q6NUN9 644 aaPredicted RBP7.12□□□□□ -1.27
USP44-207ENST00000552237 LLGL2Q6P1M3 1020 aa7.12□□□□□ -1.27
USP44-207ENST00000552237 TPTE2Q6XPS3 522 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms