RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 ARSIQ5FYB1 569 aa7.18□□□□□ -1.26
CCDC65-204ENST00000552188 GPATCH3Q96I76 525 aa7.18□□□□□ -1.26
CCDC65-204ENST00000552188 ZNF512BQ96KM6 892 aaPredicted RBP7.18□□□□□ -1.26
CCDC65-204ENST00000552188 CRBNQ96SW2 442 aa7.18□□□□□ -1.26
CCDC65-204ENST00000552188 DNAJC2Q99543 621 aaKnown RBP7.18□□□□□ -1.26
CCDC65-204ENST00000552188 ZNF341Q9BYN7 854 aa7.18□□□□□ -1.26
CCDC65-204ENST00000552188 TLR7Q9NYK1 1049 aaKnown RBP7.18□□□□□ -1.26
CCDC65-204ENST00000552188 MANSC4A6NHS7 340 aaPredicted RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 FAM155AB1AL88 458 aaPredicted RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 SMARCA5O60264 1052 aaPredicted RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 TBC1D12O60347 775 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 IGSF3O75054 1194 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 ENTPD3O75355 529 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 WDHD1O75717 1129 aaPredicted RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 TRPA1O75762 1119 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 SLC34A2O95436 690 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 MAP4K4O95819 1239 aaPredicted RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 CYP2E1P05181 493 aaPredicted RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 CYP7A1P22680 504 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 RGS3P49796 1198 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 INHBEP58166 350 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 MAP3K11Q16584 847 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 LDLRAD1Q5T700 205 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 OTUD7BQ6GQQ9 843 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 MIGA2Q7L4E1 593 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 SIRT2Q8IXJ6 389 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 TEX11Q8IYF3 940 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 TNS4Q8IZW8 715 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 NSUN4Q96CB9 384 aaKnown RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 FAM163AQ96GL9 167 aaPredicted RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 WNK4Q96J92 1243 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 WRNIP1Q96S55 665 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 TRIM34Q9BYJ4 488 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 ELP3Q9H9T3 547 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 PRDM10Q9NQV6 1147 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 TSKSQ9UJT2 592 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 ARIH1Q9Y4X5 557 aaPredicted RBP7.17□□□□□ -1.26
CCDC65-204ENST00000552188 GAKO14976 1311 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 LAMB1P07942 1786 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 DOCK1Q14185 1865 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 NAV1Q8NEY1 1877 aa7.17□□□□□ -1.26
CCDC65-204ENST00000552188 SSC5DA1L4H1 1573 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 CEP350Q5VT06 3117 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 GPR75-ASB3A0A0A6YYF3 556 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 GOLIM4O00461 696 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 SNPHO15079 494 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 EVI5O60447 810 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 ZBTB48P10074 688 aaPredicted RBP7.16□□□□□ -1.26
CCDC65-204ENST00000552188 HSPA8P11142 646 aaKnown RBP7.16□□□□□ -1.26
CCDC65-204ENST00000552188 USP5P45974 858 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 NFIAQ12857 509 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 SPRYD7Q5W111 196 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 CDAN1Q8IWY9 1227 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 MAGEB6Q8N7X4 407 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 OPTNQ96CV9 577 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 CLMNQ96JQ2 1002 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 TEPSINQ96N21 525 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 CSRNP1Q96S65 589 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 ZIC5Q96T25 663 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 IDI2Q9BXS1 227 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.16□□□□□ -1.26
CCDC65-204ENST00000552188 BOLA2Q9H3K6 86 aa7.16□□□□□ -1.26
CCDC65-204ENST00000552188 AATFQ9NY61 560 aaKnown RBP eCLIP7.16□□□□□ -1.26
CCDC65-204ENST00000552188 RPAP1Q9BWH6 1393 aaPredicted RBP7.16□□□□□ -1.26
CCDC65-204ENST00000552188 ALDH1A1P00352 501 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 NUDT7P0C024 238 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 MLLT3P42568 568 aaPredicted RBP7.15□□□□□ -1.26
CCDC65-204ENST00000552188 AAMPQ13685 434 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 VGLL4Q14135 290 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 COL13A1Q5TAT6 717 aaPredicted RBP7.15□□□□□ -1.26
CCDC65-204ENST00000552188 CERS3Q8IU89 383 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 CRACR2BQ8N4Y2 399 aaPredicted RBP7.15□□□□□ -1.26
CCDC65-204ENST00000552188 SH3RF3Q8TEJ3 882 aaPredicted RBP7.15□□□□□ -1.26
CCDC65-204ENST00000552188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.15□□□□□ -1.26
CCDC65-204ENST00000552188 TGFBRAP1Q8WUH2 860 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 ZKSCAN4Q969J2 545 aaPredicted RBP7.15□□□□□ -1.26
CCDC65-204ENST00000552188 DCTPP1Q9H773 170 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 PIH1D3Q9NQM4 214 aaKnown RBP7.15□□□□□ -1.26
CCDC65-204ENST00000552188 PICK1Q9NRD5 415 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 RNF186Q9NXI6 227 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 SAGE1Q9NXZ1 904 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 FAM198AQ9UFP1 575 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 SUPT16HQ9Y5B9 1047 aaKnown RBP7.15□□□□□ -1.26
CCDC65-204ENST00000552188 NDUFB9Q9Y6M9 179 aa7.15□□□□□ -1.26
CCDC65-204ENST00000552188 BAZ2AQ9UIF9 1905 aaKnown RBP7.15□□□□□ -1.27
CCDC65-204ENST00000552188 MAGEB6P1A0A0J9YX57 407 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 GRXCR2A6NFK2 248 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 SPDYE16A6NNV3 312 aaPredicted RBP7.14□□□□□ -1.27
CCDC65-204ENST00000552188 ERC2O15083 957 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 HLA-DOAP06340 250 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 ATP5JP18859 108 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 TM4SF4P48230 202 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 GTF2A2P52657 109 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 PPP4CP60510 307 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 DYNLL1P63167 89 aaKnown RBP7.14□□□□□ -1.27
CCDC65-204ENST00000552188 SLC9C2Q5TAH2 1124 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 ANKRD45Q5TZF3 282 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 ZSCAN25Q6NSZ9 544 aa7.14□□□□□ -1.27
CCDC65-204ENST00000552188 TMED8Q6PL24 325 aaPredicted RBP7.14□□□□□ -1.27
CCDC65-204ENST00000552188 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms