RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485		E9PSI1	815 aa		13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	NPM3	O75607	178 aa	Known RBP	13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	SPP2	Q13103	211 aa		13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	ALDH1L2	Q3SY69	923 aa		13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	RPTOR	Q8N122	1335 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	COL2A1	P02458	1487 aa	Predicted RBP	13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	MECOM	Q03112	1051 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	GPR153	Q6NV75	609 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	ERICH6	Q7L0X2	663 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	ZNF280C	Q8ND82	737 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	TBC1D2	Q9BYX2	928 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	NBPF3	Q9H094	633 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	COPRS	Q9NQ92	184 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	SMC4	Q9NTJ3	1288 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	GJD2	Q9UKL4	321 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	DDX60L	Q5H9U9	1706 aa	Known RBP	13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	PLXNB2	O15031	1838 aa		13.18	□□□□□ -0.3
PFKM-223	ENST00000551485	MNX1	P50219	401 aa	Predicted RBP	13.17	□□□□□ -0.3
PFKM-223	ENST00000551485	HMGCS2	P54868	508 aa		13.17	□□□□□ -0.3
PFKM-223	ENST00000551485	TIMM10	P62072	90 aa		13.17	□□□□□ -0.3
PFKM-223	ENST00000551485	TRIM32	Q13049	653 aa		13.17	□□□□□ -0.3
PFKM-223	ENST00000551485	ZNF384	Q8TF68	577 aa		13.17	□□□□□ -0.3
PFKM-223	ENST00000551485	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.17	□□□□□ -0.3
PFKM-223	ENST00000551485	HMX1	Q9NP08	348 aa	Predicted RBP	13.17	□□□□□ -0.3
PFKM-223	ENST00000551485	HDAC5	Q9UQL6	1122 aa		13.17	□□□□□ -0.3
PFKM-223	ENST00000551485		A0A1B0GUL7	405 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	USP17L5	A8MUK1	530 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	MAP4K4	O95819	1239 aa	Predicted RBP	13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	CAP2	P40123	477 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	MVP	Q14764	893 aa	Known RBP	13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	SH3D19	Q5HYK7	790 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	DEFB123	Q8N688	67 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	TRIB2	Q92519	343 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	XAGE2	Q96GT9	111 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	C11orf49	Q9H6J7	331 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	MORF4L1	Q9UBU8	362 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	OGDHL	Q9ULD0	1010 aa		13.16	□□□□□ -0.3
PFKM-223	ENST00000551485	SYN1	P17600	705 aa		13.15	□□□□□ -0.3
PFKM-223	ENST00000551485	MAGEA10	P43363	369 aa	Predicted RBP	13.15	□□□□□ -0.3
PFKM-223	ENST00000551485	GSTO1	P78417	241 aa		13.15	□□□□□ -0.3
PFKM-223	ENST00000551485	SLFN5	Q08AF3	891 aa		13.15	□□□□□ -0.3
PFKM-223	ENST00000551485	RRP1B	Q14684	758 aa	Known RBP	13.15	□□□□□ -0.3
PFKM-223	ENST00000551485	LRIT3	Q3SXY7	679 aa		13.15	□□□□□ -0.3
PFKM-223	ENST00000551485	AKAP2	Q9Y2D5	859 aa		13.15	□□□□□ -0.3
PFKM-223	ENST00000551485	LDHC	P07864	332 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	KCNA4	P22459	653 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	IRX3	P78415	501 aa	Predicted RBP	13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	TFCP2	Q12800	502 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	MAP3K21	Q5TCX8	1036 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485		Q7L0L9	218 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	TDH	Q8IZJ6	230 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	NSUN4	Q96CB9	384 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	MEIS3	Q99687	375 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	AS3MT	Q9HBK9	375 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	HMG20B	Q9P0W2	317 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	HERC5	Q9UII4	1024 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	STXBP5L	Q9Y2K9	1186 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	UNC80	Q8N2C7	3258 aa		13.14	□□□□□ -0.31
PFKM-223	ENST00000551485	PFAS	O15067	1338 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	PRKAR2A	P13861	404 aa	Known RBP	13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	CYP2B6	P20813	491 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	MTMR2	Q13614	643 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	PI16	Q6UXB8	463 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	TEX11	Q8IYF3	940 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	SPATA5	Q8NB90	893 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	SOCS4	Q8WXH5	440 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	NUDT12	Q9BQG2	462 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	WDR18	Q9BV38	432 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	API5	Q9BZZ5	524 aa	Known RBP	13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	NOB1	Q9ULX3	412 aa	Known RBP	13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	SIPA1L1	O43166	1804 aa		13.13	□□□□□ -0.31
PFKM-223	ENST00000551485	XRCC5	P13010	732 aa	Known RBP	13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	HOXA7	P31268	230 aa	Predicted RBP	13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	BACE1	P56817	501 aa		13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	TBC1D9	Q6ZT07	1266 aa		13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	UBE2O	Q9C0C9	1292 aa	Known RBP	13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	TXNRD2	Q9NNW7	524 aa		13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	MTMR10	Q9NXD2	777 aa		13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	TMOD4	Q9NZQ9	345 aa		13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	RAI14	Q9P0K7	980 aa		13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	PI4KB	Q9UBF8	816 aa		13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.12	□□□□□ -0.31
PFKM-223	ENST00000551485	LAMA2	P24043	3122 aa	Known RBP	13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	SRGAP3	O43295	1099 aa		13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	ASNS	P08243	561 aa		13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	COL6A1	P12109	1028 aa		13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	ZKSCAN1	P17029	563 aa	Predicted RBP	13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	ARID4A	P29374	1257 aa	Predicted RBP	13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	HERVK_113	P62684	666 aa		13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	TRMT44	Q8IYL2	757 aa	Known RBP	13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	GPRC5A	Q8NFJ5	357 aa		13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	NEUROD6	Q96NK8	337 aa		13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	P2RX7	Q99572	595 aa	Known RBP	13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	DHX36	Q9H2U1	1008 aa	Known RBP	13.11	□□□□□ -0.31
PFKM-223	ENST00000551485	DNAH12	Q6ZR08	3092 aa		13.1	□□□□□ -0.31

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