RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	CRBN	Q96SW2	442 aa		11.76	□□□□□ -0.53
PFKM-222	ENST00000551339	DHX36	Q9H2U1	1008 aa	Known RBP	11.76	□□□□□ -0.53
PFKM-222	ENST00000551339	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.76	□□□□□ -0.53
PFKM-222	ENST00000551339	PI4KB	Q9UBF8	816 aa		11.76	□□□□□ -0.53
PFKM-222	ENST00000551339	PCDHB15	Q9Y5E8	787 aa		11.76	□□□□□ -0.53
PFKM-222	ENST00000551339	CAP2	P40123	477 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	LACTB	P83111	547 aa	Predicted RBP	11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	ARHGEF6	Q15052	776 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	FASTKD5	Q7L8L6	764 aa	Known RBP	11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	CCDC84	Q86UT8	332 aa	Predicted RBP	11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	METTL16	Q86W50	562 aa	Known RBP	11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	MAPKAPK5	Q8IW41	473 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	MAGEB6	Q8N7X4	407 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	LRRCC1	Q9C099	1032 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	ARHGAP39	Q9C0H5	1083 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	CPA4	Q9UI42	421 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	HERC5	Q9UII4	1024 aa	Known RBP	11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	FLT1	P17948	1338 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	ADGRA2	Q96PE1	1338 aa		11.75	□□□□□ -0.53
PFKM-222	ENST00000551339	DOCK2	Q92608	1830 aa		11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	PDE4DIP	Q5VU43	2346 aa		11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	IFIT2	P09913	472 aa	Known RBP	11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	CYP2C8	P10632	490 aa		11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	MAP3K12	Q12852	859 aa		11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	TMED8	Q6PL24	325 aa	Predicted RBP	11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	ARMC5	Q96C12	935 aa		11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	PALD1	Q9ULE6	856 aa		11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.74	□□□□□ -0.53
PFKM-222	ENST00000551339	TRIM75P	A6NK02	468 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	CTGF	P29279	349 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	JAG1	P78504	1218 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	SPP2	Q13103	211 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	KIF22	Q14807	665 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	TTF1	Q15361	905 aa	Predicted RBP	11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	GADL1	Q6ZQY3	521 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	MIGA1	Q8NAN2	632 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	DNAJC18	Q9H819	358 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	SLC45A1	Q9Y2W3	748 aa		11.73	□□□□□ -0.53
PFKM-222	ENST00000551339	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	USP17L5	A8MUK1	530 aa		11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	GNRH1	P01148	92 aa		11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	BCR	P11274	1271 aa		11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	PSMC4	P43686	418 aa		11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	HDAC1	Q13547	482 aa	Predicted RBP	11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	CERS3	Q8IU89	383 aa		11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	ZNF280C	Q8ND82	737 aa		11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	PARK7	Q99497	189 aa	Known RBP	11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	RIOK1	Q9BRS2	568 aa	Known RBP	11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	BCL11A	Q9H165	835 aa		11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	SAP30BP	Q9UHR5	308 aa	Known RBP	11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	PTCH2	Q9Y6C5	1203 aa		11.72	□□□□□ -0.53
PFKM-222	ENST00000551339	GOLIM4	O00461	696 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	ECM2	O94769	699 aa	Predicted RBP	11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	PDE6A	P16499	860 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	ATP5J	P18859	108 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	USP5	P45974	858 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	TREML2	Q5T2D2	321 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	SLC9C2	Q5TAH2	1124 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	TRIM47	Q96LD4	638 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	WDR18	Q9BV38	432 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	TBC1D2	Q9BYX2	928 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	BOLA2	Q9H3K6	86 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	AGTPBP1	Q9UPW5	1226 aa		11.71	□□□□□ -0.53
PFKM-222	ENST00000551339	MAST2	Q6P0Q8	1798 aa		11.71	□□□□□ -0.54
PFKM-222	ENST00000551339	PHIP	Q8WWQ0	1821 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	MAGEB6P1	A0A0J9YX57	407 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	TCRBV5S4A2T	A0A5A2	114 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	POTEF	A5A3E0	1075 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	SMARCA5	O60264	1052 aa	Predicted RBP	11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	FMNL1	O95466	1100 aa	Predicted RBP	11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	HLA-DOA	P06340	250 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	PRMT2	P55345	433 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	SH3D19	Q5HYK7	790 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	GCC1	Q96CN9	775 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	EDC3	Q96F86	508 aa	Known RBP	11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	ZNF333	Q96JL9	665 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	DNAJC2	Q99543	621 aa	Known RBP	11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	SRRD	Q9UH36	339 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	DOCK1	Q14185	1865 aa		11.7	□□□□□ -0.54
PFKM-222	ENST00000551339	ZNF532	Q9HCE3	1301 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	GDF11	O95390	407 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	ASNS	P08243	561 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	OSBP	P22059	807 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	HOXD10	P28358	340 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	HMGCS2	P54868	508 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	SLC4A8	Q2Y0W8	1093 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	SLC9C1	Q4G0N8	1177 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	PRPF38B	Q5VTL8	546 aa	Known RBP	11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	TATDN1	Q6P1N9	297 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	NBPF11	Q86T75	865 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	EXOC6	Q8TAG9	804 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	HAUS7	Q99871	368 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	TRIM34	Q9BYJ4	488 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	AS3MT	Q9HBK9	375 aa		11.69	□□□□□ -0.54
PFKM-222	ENST00000551339	GINM1	Q9NU53	330 aa		11.69	□□□□□ -0.54

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