RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 NUB1Q9Y5A7 615 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 TACC3Q9Y6A5 838 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 PTPN23Q9H3S7 1636 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 KRT75O95678 551 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 KLC1Q07866 573 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 STXBP4Q6ZWJ1 553 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 THOC1Q96FV9 657 aaKnown RBP9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 FERMT1Q9BQL6 677 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 EXOC1Q9NV70 894 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 RGS12O14924 1447 aa9.74□□□□□ -0.85
PPFIA2-220ENST00000550584 GOLGA8QA0A0J9YX86 632 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 GOLGA8OA6NCC3 632 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 GOLGA8NF8WBI6 632 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 MCF2LO15068 1137 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 ZWINTO95229 277 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 PRKAR2BP31323 418 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 MYSM1Q5VVJ2 828 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 NAIF1Q69YI7 327 aaPredicted RBP9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 CARD10Q9BWT7 1032 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 XPO4Q9C0E2 1151 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 DNAI2Q9GZS0 605 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 TSC22D4Q9Y3Q8 395 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 ASXL1Q8IXJ9 1541 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 DCTN3O75935 186 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 KRT4P19013 534 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 NEK2P51955 445 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 SMTNP53814 917 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 AK2P54819 239 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 KRT13P13646 458 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 IKQ13123 557 aaPredicted RBP9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 NNTQ13423 1086 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 MORC4Q8TE76 937 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 HNRNPLLQ8WVV9 542 aaKnown RBP9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 CALML4Q96GE6 196 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 IWS1Q96ST2 819 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 ECHDC1Q9NTX5 307 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 SAMM50Q9Y512 469 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 TULP2O00295 520 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 E2F6O75461 281 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 TNIP1Q15025 636 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 NEUROD6Q96NK8 337 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 IL9RQ01113 521 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 HS2ST1Q7LGA3 356 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 TRIM42Q8IWZ5 723 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 TM6SF1Q9BZW5 370 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 EPS15L1Q9UBC2 864 aa9.73□□□□□ -0.85
PPFIA2-220ENST00000550584 TRIM66O15016 1216 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 ITIH3Q06033 890 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 C6orf118Q5T5N4 469 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 NLRP7Q8WX94 980 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 CASP10Q92851 521 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 TBC1D23Q9NUY8 699 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 SCHIP1Q9P0W5 487 aaPredicted RBP9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 LIN7AO14910 233 aaPredicted RBP9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 CUTAO60888 179 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 EGFL6Q8IUX8 553 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 PPP1R14BQ96C90 147 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 KRT23Q9C075 422 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 ZBTB40Q9NUA8 1239 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 SMIM23A6NLE4 172 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 GADD45BO75293 160 aaPredicted RBP9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 LRMPQ12912 555 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 HEATR3Q7Z4Q2 680 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 ABCB6Q9NP58 842 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 INTS9Q9NV88 658 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 BBOF1Q8ND07 529 aa9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 RBM42Q9BTD8 480 aaKnown RBP9.72□□□□□ -0.85
PPFIA2-220ENST00000550584 PECAM1P16284 738 aaPredicted RBP9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 VCAM1P19320 739 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 IARSP41252 1262 aaKnown RBP9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 ATP1A2P50993 1020 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 LGSNQ5TDP6 509 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 AFAP1L2Q8N4X5 818 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 BRF1Q92994 677 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 TCP11L1Q9NUJ3 509 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 POLKQ9UBT6 870 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 FAM135BQ49AJ0 1406 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 KCNA4P22459 653 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 OCA2Q04671 838 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 MYO1EQ12965 1108 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 CUL1Q13616 776 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 NLRP14Q86W24 1093 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 PLEKHM2Q8IWE5 1019 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 B4GALNT2Q8NHY0 566 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 MIEF2Q96C03 454 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 POLR3AO14802 1390 aaPredicted RBP9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 NUP160Q12769 1436 aa9.71□□□□□ -0.85
PPFIA2-220ENST00000550584 UHRF1BP1LA0JNW5 1464 aa9.71□□□□□ -0.86
PPFIA2-220ENST00000550584 GMNCA6NCL1 334 aa9.71□□□□□ -0.86
PPFIA2-220ENST00000550584 EIF3HO15372 352 aaKnown RBP eCLIP9.71□□□□□ -0.86
PPFIA2-220ENST00000550584 ADRM1Q16186 407 aa9.71□□□□□ -0.86
PPFIA2-220ENST00000550584 RIC3Q7Z5B4 369 aa9.71□□□□□ -0.86
PPFIA2-220ENST00000550584 UBL4BQ8N7F7 174 aa9.71□□□□□ -0.86
PPFIA2-220ENST00000550584 CACTINQ8WUQ7 758 aaKnown RBP9.71□□□□□ -0.86
PPFIA2-220ENST00000550584 GRAMD1AQ96CP6 724 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms