RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
NR4A1-215ENST00000550557 PATL2C9JE40 543 aaKnown RBP13.83□□□□□ -0.2
NR4A1-215ENST00000550557 CHMP2AO43633 222 aa13.83□□□□□ -0.2
NR4A1-215ENST00000550557 ANGEL1Q9UNK9 670 aaKnown RBP13.83□□□□□ -0.2
NR4A1-215ENST00000550557 DIP2BQ9P265 1576 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 CTAGE5O15320 804 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 MCM7P33993 719 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 PRIMPOLQ96LW4 560 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 F13A1P00488 732 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 ZNF445P59923 1031 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 ASIC1P78348 528 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 KCTD2Q14681 263 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 CCDC125Q86Z20 511 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 V9GY48 417 aaPredicted RBP13.82□□□□□ -0.2
NR4A1-215ENST00000550557 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 HLFQ16534 295 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 TBC1D9BQ66K14 1250 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 SYNE4Q8N205 404 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 FAM227BQ96M60 508 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 LZTS2Q9BRK4 669 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 RBSNQ9H1K0 784 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 COPRSQ9NQ92 184 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 CNPY2Q9Y2B0 182 aa13.82□□□□□ -0.2
NR4A1-215ENST00000550557 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
NR4A1-215ENST00000550557 PPARAQ07869 468 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 TBC1D10BQ4KMP7 808 aaPredicted RBP13.81□□□□□ -0.2
NR4A1-215ENST00000550557 FILIP1Q7Z7B0 1213 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 MARCH10Q8NA82 808 aaPredicted RBP13.81□□□□□ -0.2
NR4A1-215ENST00000550557 SLC16A10Q8TF71 515 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 BRIP1Q9BX63 1249 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 DDX19AQ9NUU7 478 aaKnown RBP13.81□□□□□ -0.2
NR4A1-215ENST00000550557 RMND1Q9NWS8 449 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 STAP2Q9UGK3 403 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 PNMA2Q9UL42 364 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 ARHGEF28Q8N1W1 1705 aaKnown RBP13.81□□□□□ -0.2
NR4A1-215ENST00000550557 DTHD1Q6ZMT9 781 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 HS2ST1Q7LGA3 356 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 MYOM1P52179 1685 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 TMEM131LA2VDJ0 1609 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 GNPTABQ3T906 1256 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 SDR42E1Q8WUS8 393 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 CCDC17Q96LX7 622 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 ZNF277Q9NRM2 450 aaPredicted RBP13.81□□□□□ -0.2
NR4A1-215ENST00000550557 RIMS1Q86UR5 1692 aaKnown RBP13.81□□□□□ -0.2
NR4A1-215ENST00000550557 USP31Q70CQ4 1352 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 NFIXQ14938 502 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 EZH2Q15910 746 aaKnown RBP13.81□□□□□ -0.2
NR4A1-215ENST00000550557 FAM114A1Q8IWE2 563 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 SNX14Q9Y5W7 946 aa13.81□□□□□ -0.2
NR4A1-215ENST00000550557 BIN1O00499 593 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 CIAO1O76071 339 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 HSPA4P34932 840 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 JAKMIP3Q5VZ66 844 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 RRAGBQ5VZM2 374 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 KIAA1328Q86T90 577 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 KCNG4Q8TDN1 519 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 EAF2Q96CJ1 260 aaPredicted RBP13.8□□□□□ -0.2
NR4A1-215ENST00000550557 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
NR4A1-215ENST00000550557 SYKP43405 635 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 AFMP43652 599 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 AKNAD1Q5T1N1 836 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 GLG1Q92896 1179 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
NR4A1-215ENST00000550557 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 KIF4AO95239 1232 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 ADCY7P51828 1080 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 USP14P54578 494 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 TDRD12Q587J7 1177 aaKnown RBP13.8□□□□□ -0.2
NR4A1-215ENST00000550557 LPXNO60711 386 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 TAF4BQ92750 862 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 EDC3Q96F86 508 aaKnown RBP13.8□□□□□ -0.2
NR4A1-215ENST00000550557 TRIM47Q96LD4 638 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 ZMYND15Q9H091 742 aa13.8□□□□□ -0.2
NR4A1-215ENST00000550557 SPA17Q15506 151 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 GPBP1L1Q9HC44 474 aaPredicted RBP13.79□□□□□ -0.2
NR4A1-215ENST00000550557 ANKRD62A6NC57 917 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 DEXIO95424 95 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 MYCP01106 439 aaPredicted RBP13.79□□□□□ -0.2
NR4A1-215ENST00000550557 RFX1P22670 979 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 NLRX1Q86UT6 975 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 MLXIPQ9HAP2 919 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 PRKAG2Q9UGJ0 569 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 MYO3BQ8WXR4 1341 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 MARCKSP29966 332 aaPredicted RBP13.79□□□□□ -0.2
NR4A1-215ENST00000550557 DNM2P50570 870 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 GIMAP6Q6P9H5 292 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 ZNF830Q96NB3 372 aaPredicted RBP13.79□□□□□ -0.2
NR4A1-215ENST00000550557 TRIM6Q9C030 488 aaPredicted RBP13.79□□□□□ -0.2
NR4A1-215ENST00000550557 LMBRD1Q9NUN5 540 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 DDX39AO00148 427 aaKnown RBP13.79□□□□□ -0.2
NR4A1-215ENST00000550557 CHRNA5P30532 468 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 NOLC1Q14978 699 aaKnown RBP eCLIP13.79□□□□□ -0.2
NR4A1-215ENST00000550557 SLC15A2Q16348 729 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
NR4A1-215ENST00000550557 GPR101Q96P66 508 aaPredicted RBP13.79□□□□□ -0.2
NR4A1-215ENST00000550557 NCAPD2Q15021 1401 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms