RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	CLSTN2	Q9H4D0	955 aa		13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	POLR3E	Q9NVU0	708 aa		13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.74	□□□□□ -0.21
LETMD1-223	ENST00000550442	ERICH2	A1L162	156 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	KDM4A	O75164	1064 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	APP	P05067	770 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	PHKA1	P46020	1223 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	SCNN1D	P51172	638 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	SCARF1	Q14162	830 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	ADAL	Q6DHV7	355 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	SASS6	Q6UVJ0	657 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	CCDC73	Q6ZRK6	1079 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	STAG1	Q8WVM7	1258 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	C8orf76	Q96K31	380 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	NAT10	Q9H0A0	1025 aa	Known RBP	13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	ZNF408	Q9H9D4	720 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	GDPD2	Q9HCC8	539 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	SAGE1	Q9NXZ1	904 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	TAF6L	Q9Y6J9	622 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	NDUFB9	Q9Y6M9	179 aa		13.73	□□□□□ -0.21
LETMD1-223	ENST00000550442	KLF18	A0A0U1RQI7	1052 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	CHRND	Q07001	517 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	TRIM29	Q14134	588 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	AKNAD1	Q5T1N1	836 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	OLFM4	Q6UX06	510 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	MFSD6	Q6ZSS7	791 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	CTU1	Q7Z7A3	348 aa	Known RBP	13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	IFNL3	Q8IZI9	196 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	FAM177A1	Q8N128	213 aa	Predicted RBP	13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	TCEANC2	Q96MN5	208 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	PIH1D3	Q9NQM4	214 aa	Known RBP	13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	ZKSCAN5	Q9Y2L8	839 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	TCHH	Q07283	1943 aa		13.72	□□□□□ -0.21
LETMD1-223	ENST00000550442	SH2B2	O14492	632 aa	Predicted RBP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	FOXP2	O15409	715 aa		13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	CTDNEP1	O95476	244 aa		13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	SLC3A2	P08195	630 aa	Known RBP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	HCLS1	P14317	486 aa	Predicted RBP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	GTF2E1	P29083	439 aa	Predicted RBP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	ALDH1B1	P30837	517 aa		13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	METAP2	P50579	478 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	RASGRF1	Q13972	1273 aa		13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	CCDC178	Q5BJE1	867 aa		13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	BICD2	Q8TD16	824 aa		13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	PSMD1	Q99460	953 aa		13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	ADARB2	Q9NS39	739 aa	Known RBP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	LRP2BP	Q9P2M1	347 aa		13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	ORC3	Q9UBD5	711 aa	Predicted RBP	13.71	□□□□□ -0.21
LETMD1-223	ENST00000550442	DOCK2	Q92608	1830 aa		13.71	□□□□□ -0.22
LETMD1-223	ENST00000550442	LAMA4	Q16363	1823 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	GOLGA8B	A8MQT2	603 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	ZBTB43	O43298	467 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	JAK2	O60674	1132 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	KIN	O60870	393 aa	Known RBP	13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	CALM1	P0DP23	149 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	CALM2	P0DP24	149 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	CALM3	P0DP25	149 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	XBP1	P17861	261 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	ADD1	P35611	737 aa	Known RBP	13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	FAM160A1	Q05DH4	1040 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	KIAA2012	Q0VF49	1180 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	SAFB	Q15424	915 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	VPS37D	Q86XT2	251 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	TRIM22	Q8IYM9	498 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	MAGEB6	Q8N7X4	407 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	TIGD1	Q96MW7	591 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	DACT1	Q9NYF0	836 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	SLC12A7	Q9Y666	1083 aa		13.7	□□□□□ -0.22
LETMD1-223	ENST00000550442	CCDC69	A6NI79	296 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	MYO1B	O43795	1136 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	PPP6R2	O75170	966 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	IFNAR1	P17181	557 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	RPS8	P62241	208 aa	Known RBP	13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	TTLL5	Q6EMB2	1281 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	FBXO33	Q7Z6M2	555 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	FERMT3	Q86UX7	667 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	LARGE2	Q8N3Y3	721 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	IGDCC4	Q8TDY8	1250 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	ESR2	Q92731	530 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	CCDC34	Q96HJ3	373 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	ZIC5	Q96T25	663 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	ANO10	Q9NW15	660 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	HPS5	Q9UPZ3	1129 aa		13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	DDX60	Q8IY21	1712 aa	Known RBP	13.69	□□□□□ -0.22
LETMD1-223	ENST00000550442	GSG1L2	A8MUP6	293 aa		13.68	□□□□□ -0.22
LETMD1-223	ENST00000550442	PTMA	P06454	111 aa	Known RBP	13.68	□□□□□ -0.22
LETMD1-223	ENST00000550442	FGR	P09769	529 aa		13.68	□□□□□ -0.22
LETMD1-223	ENST00000550442	HUNK	P57058	714 aa		13.68	□□□□□ -0.22
LETMD1-223	ENST00000550442	SF3A1	Q15459	793 aa	Known RBP	13.68	□□□□□ -0.22
LETMD1-223	ENST00000550442	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.68	□□□□□ -0.22
LETMD1-223	ENST00000550442	APOA5	Q6Q788	366 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 226.1 ms