RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ATG4CQ96DT6 458 aa8.16□□□□□ -1.1
HCFC2-204ENST00000550335 CHURC1-FNTBB4DL54 471 aa8.15□□□□□ -1.1
HCFC2-204ENST00000550335 DNAJC6O75061 913 aa8.15□□□□□ -1.1
HCFC2-204ENST00000550335 NLRC3Q7RTR2 1065 aa8.15□□□□□ -1.1
HCFC2-204ENST00000550335 KLHL23Q8NBE8 558 aa8.15□□□□□ -1.1
HCFC2-204ENST00000550335 GALNT11Q8NCW6 608 aa8.15□□□□□ -1.1
HCFC2-204ENST00000550335 FAM86C1Q9NVL1 165 aa8.15□□□□□ -1.1
HCFC2-204ENST00000550335 CACNA2D2Q9NY47 1150 aa8.15□□□□□ -1.1
HCFC2-204ENST00000550335 GMIPQ9P107 970 aa8.15□□□□□ -1.1
HCFC2-204ENST00000550335 UPK3BL1B0FP48 263 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 UPK3BL2E5RIL1 263 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 NME1P15531 152 aaKnown RBP8.14□□□□□ -1.11
HCFC2-204ENST00000550335 RAG1P15918 1043 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 C21orf62-AS1Q17RA5 79 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 PLEKHG4Q58EX7 1191 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 AKAP4Q5JQC9 854 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 PPM1JQ5JR12 505 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 KIAA1211LQ6NV74 962 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 C1orf229Q6ZS94 237 aaPredicted RBP8.14□□□□□ -1.11
HCFC2-204ENST00000550335 CHSY3Q70JA7 882 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 CYFIP1Q7L576 1253 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 C19orf47Q8N9M1 422 aaKnown RBP8.14□□□□□ -1.11
HCFC2-204ENST00000550335 ZCRB1Q8TBF4 217 aaKnown RBP8.14□□□□□ -1.11
HCFC2-204ENST00000550335 ACDQ96AP0 544 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 SPC25Q9HBM1 224 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 SLC12A7Q9Y666 1083 aa8.14□□□□□ -1.11
HCFC2-204ENST00000550335 PRR36Q9H6K5 1346 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 LTBP3Q9NS15 1303 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 LOC100289279A0A1B0GTE1 492 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 DNAJA2O60884 412 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 AOC2O75106 756 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 ACRP10323 421 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 GYS2P54840 703 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 SQSTM1Q13501 440 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 SETDB1Q15047 1291 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 GNPTABQ3T906 1256 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 EEPD1Q7L9B9 569 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 PHACTR4Q8IZ21 702 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 FAM13CQ8NE31 585 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 THAP3Q8WTV1 239 aaPredicted RBP8.13□□□□□ -1.11
HCFC2-204ENST00000550335 SLC9A7Q96T83 725 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 NRSN2Q9GZP1 204 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 ZMYM5Q9UJ78 669 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 COL4A3BPQ9Y5P4 624 aa8.13□□□□□ -1.11
HCFC2-204ENST00000550335 MEIS3P2A8K0S8 358 aa8.12□□□□□ -1.11
HCFC2-204ENST00000550335 ADAMTS2O95450 1211 aa8.12□□□□□ -1.11
HCFC2-204ENST00000550335 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
HCFC2-204ENST00000550335 CD68P34810 354 aaPredicted RBP8.12□□□□□ -1.11
HCFC2-204ENST00000550335 SRSF11Q05519 484 aaKnown RBP8.12□□□□□ -1.11
HCFC2-204ENST00000550335 KIF4BQ2VIQ3 1234 aa8.12□□□□□ -1.11
HCFC2-204ENST00000550335 C2orf27AQ580R0 203 aa8.12□□□□□ -1.11
HCFC2-204ENST00000550335 HP1BP3Q5SSJ5 553 aaPredicted RBP8.12□□□□□ -1.11
HCFC2-204ENST00000550335 TRAPPC3LQ5T215 181 aa8.12□□□□□ -1.11
HCFC2-204ENST00000550335 MRM1Q6IN84 353 aaKnown RBP8.12□□□□□ -1.11
HCFC2-204ENST00000550335 BTBD6Q96KE9 485 aa8.12□□□□□ -1.11
HCFC2-204ENST00000550335 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
HCFC2-204ENST00000550335 KCNK4Q9NYG8 393 aa8.12□□□□□ -1.11
HCFC2-204ENST00000550335 H3BM21 787 aa8.11□□□□□ -1.11
HCFC2-204ENST00000550335 ASMTLO95671 621 aa8.11□□□□□ -1.11
HCFC2-204ENST00000550335 DLGAP3O95886 979 aa8.11□□□□□ -1.11
HCFC2-204ENST00000550335 NCAPHQ15003 741 aa8.11□□□□□ -1.11
HCFC2-204ENST00000550335 ZC3H12AQ5D1E8 599 aaKnown RBP8.11□□□□□ -1.11
HCFC2-204ENST00000550335 C16orf86Q6ZW13 317 aa8.11□□□□□ -1.11
HCFC2-204ENST00000550335 UBASH3BQ8TF42 649 aa8.11□□□□□ -1.11
HCFC2-204ENST00000550335 NOP58Q9Y2X3 529 aaKnown RBP8.11□□□□□ -1.11
HCFC2-204ENST00000550335 PTCH2Q9Y6C5 1203 aa8.11□□□□□ -1.11
HCFC2-204ENST00000550335 ADAM11O75078 769 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 TP53P04637 393 aaPredicted RBP8.1□□□□□ -1.11
HCFC2-204ENST00000550335 SLC7A5Q01650 507 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 DUOXA2Q1HG44 320 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 TAF7LQ5H9L4 462 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
HCFC2-204ENST00000550335 INTS3Q68E01 1043 aaKnown RBP8.1□□□□□ -1.11
HCFC2-204ENST00000550335 CDC37L1Q7L3B6 337 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 ST13P5Q8NFI4 369 aaPredicted RBP8.1□□□□□ -1.11
HCFC2-204ENST00000550335 PPP1R14AQ96A00 147 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 ACSF2Q96CM8 615 aaPredicted RBP8.1□□□□□ -1.11
HCFC2-204ENST00000550335 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 PHAXQ9H814 394 aaKnown RBP8.1□□□□□ -1.11
HCFC2-204ENST00000550335 CNNM2Q9H8M5 875 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 SSU72Q9NP77 194 aaKnown RBP8.1□□□□□ -1.11
HCFC2-204ENST00000550335 TMEM260Q9NX78 707 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 TACC3Q9Y6A5 838 aa8.1□□□□□ -1.11
HCFC2-204ENST00000550335 RNGTTO60942 597 aaKnown RBP8.09□□□□□ -1.11
HCFC2-204ENST00000550335 FAM153BP0C7A2 387 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 GBP1P32455 592 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 YARSP54577 528 aaKnown RBP8.09□□□□□ -1.11
HCFC2-204ENST00000550335 ID3Q02535 119 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 TKFCQ3LXA3 575 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
HCFC2-204ENST00000550335 SV2CQ496J9 727 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 TMEM201Q5SNT2 666 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 CDCP2Q5VXM1 449 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
HCFC2-204ENST00000550335 TAB3Q8N5C8 712 aaPredicted RBP8.09□□□□□ -1.11
HCFC2-204ENST00000550335 SLC16A10Q8TF71 515 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 KIF2CQ99661 725 aa8.09□□□□□ -1.11
HCFC2-204ENST00000550335 DPH2Q9BQC3 489 aaPredicted RBP8.09□□□□□ -1.11
HCFC2-204ENST00000550335 RRAGCQ9HB90 399 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms