RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 ABHD8Q96I13 439 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 FAM84BQ96KN1 310 aaPredicted RBP8.34□□□□□ -1.07
TMEM116-208ENST00000549537 PAPPA2Q9BXP8 1791 aa8.34□□□□□ -1.07
TMEM116-208ENST00000549537 FAM205AQ6ZU69 1335 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 MROH5Q6ZUA9 1318 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 PLIN1O60240 522 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 HUNKP57058 714 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 MAP2K1Q02750 393 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-208ENST00000549537 TRIM32Q13049 653 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 KIAA0825Q8IV33 1275 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 OGFOD1Q8N543 542 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 MTMR14Q8NCE2 650 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 ARHGAP45Q92619 1136 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 ZIC5Q96T25 663 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 FAM117AQ9C073 453 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 GBA2Q9HCG7 927 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-208ENST00000549537 ATP13A2Q9NQ11 1180 aa8.33□□□□□ -1.08
TMEM116-208ENST00000549537 SCAF8Q9UPN6 1271 aaKnown RBP8.33□□□□□ -1.08
TMEM116-208ENST00000549537 AOX1Q06278 1338 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 PDE8BO95263 885 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 FGFR2P21802 821 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 GYG1P46976 350 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 MMP16P51512 607 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 PTPN12Q05209 780 aaKnown RBP8.32□□□□□ -1.08
TMEM116-208ENST00000549537 INTS3Q68E01 1043 aaKnown RBP8.32□□□□□ -1.08
TMEM116-208ENST00000549537 RGMBQ6NW40 437 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 ATG9AQ7Z3C6 839 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 FBXO33Q7Z6M2 555 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 C2orf69Q8N8R5 385 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 API5Q9BZZ5 524 aaKnown RBP8.32□□□□□ -1.08
TMEM116-208ENST00000549537 PRDM9Q9NQV7 894 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 PCDHAC2Q9Y5I4 1007 aa8.32□□□□□ -1.08
TMEM116-208ENST00000549537 COL1A1P02452 1464 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-208ENST00000549537 KIF16BQ96L93 1317 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 EYA2O00167 538 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 BCAR3O75815 825 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 UBTFL1P0CB47 393 aaPredicted RBP8.31□□□□□ -1.08
TMEM116-208ENST00000549537 SMPD1P17405 629 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 HIBADHP31937 336 aaKnown RBP8.31□□□□□ -1.08
TMEM116-208ENST00000549537 CLCN1P35523 988 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 FKBP1BP68106 108 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 NOGQ13253 232 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 GRM1Q13255 1194 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 METTL24Q5JXM2 366 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 PRAMEF18Q5VWM3 479 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 RGS22Q8NE09 1264 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 AIDAQ96BJ3 306 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 MEIS3Q99687 375 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 HDAC9Q9UKV0 1011 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 TNNQ9UQP3 1299 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 JAG2Q9Y219 1238 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 MKI67P46013 3256 aaKnown RBP8.31□□□□□ -1.08
TMEM116-208ENST00000549537 SSC5DA1L4H1 1573 aa8.31□□□□□ -1.08
TMEM116-208ENST00000549537 FAM181BA6NEQ2 426 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
TMEM116-208ENST00000549537 CIAO1O76071 339 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 TRIM27P14373 513 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 DLGAP5Q15398 846 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 GRIK5Q16478 980 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 CFAP100Q494V2 611 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 MFSD14BQ5SR56 506 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 MOB2Q70IA6 237 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 APOBEC3FQ8IUX4 373 aaKnown RBP8.3□□□□□ -1.08
TMEM116-208ENST00000549537 PRMT6Q96LA8 375 aaPredicted RBP8.3□□□□□ -1.08
TMEM116-208ENST00000549537 MRGPRX2Q96LB1 330 aa8.3□□□□□ -1.08
TMEM116-208ENST00000549537 LRRFIP2Q9Y608 721 aaKnown RBP8.3□□□□□ -1.08
TMEM116-208ENST00000549537 F8W031 263 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-208ENST00000549537 ZNF157P51786 506 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-208ENST00000549537 HNRNPUQ00839 825 aaKnown RBP eCLIP8.29□□□□□ -1.08
TMEM116-208ENST00000549537 MTX1Q13505 466 aa8.29□□□□□ -1.08
TMEM116-208ENST00000549537 PUM3Q15397 648 aaKnown RBP8.29□□□□□ -1.08
TMEM116-208ENST00000549537 ATF7IPQ6VMQ6 1270 aa8.29□□□□□ -1.08
TMEM116-208ENST00000549537 RASAL3Q86YV0 1011 aa8.29□□□□□ -1.08
TMEM116-208ENST00000549537 PHOX2BQ99453 314 aa8.29□□□□□ -1.08
TMEM116-208ENST00000549537 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
TMEM116-208ENST00000549537 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
TMEM116-208ENST00000549537 COPRSQ9NQ92 184 aa8.29□□□□□ -1.08
TMEM116-208ENST00000549537 IQSEC3Q9UPP2 1182 aaPredicted RBP8.29□□□□□ -1.08
TMEM116-208ENST00000549537 LAMB1P07942 1786 aa8.29□□□□□ -1.08
TMEM116-208ENST00000549537 MYH13Q9UKX3 1938 aa8.29□□□□□ -1.08
TMEM116-208ENST00000549537 CLRN2A0PK11 232 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 UBE2Q2LH0YL09 131 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 CA12O43570 354 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 CDK11BP21127 795 aaKnown RBP8.28□□□□□ -1.08
TMEM116-208ENST00000549537 MDM2Q00987 491 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-208ENST00000549537 KIF23Q02241 960 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-208ENST00000549537 MLLT1Q03111 559 aaPredicted RBP8.28□□□□□ -1.08
TMEM116-208ENST00000549537 CAVIN4Q5BKX8 364 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 LDLRAD1Q5T700 205 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 LPIN2Q92539 896 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 CSRNP1Q96S65 589 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 DEFB129Q9H1M3 183 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 SERPINA10Q9UK55 444 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 TTF2Q9UNY4 1162 aaKnown RBP8.28□□□□□ -1.08
TMEM116-208ENST00000549537 PA2G4Q9UQ80 394 aaKnown RBP8.28□□□□□ -1.08
TMEM116-208ENST00000549537 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
TMEM116-208ENST00000549537 ZBED9Q6R2W3 1325 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms