RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 LINC00114Q6XXX2 140 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 FAM196AQ6ZSG2 479 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
COX6A1-202ENST00000549525 IGFLR1Q9H665 355 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 RRAGCQ9HB90 399 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 DNAJB12Q9NXW2 375 aaKnown RBP8.48□□□□□ -1.05
COX6A1-202ENST00000549525 EGFL7Q9UHF1 273 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 NAGPAQ9UK23 515 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 SLC6A14Q9UN76 642 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 NRAPQ86VF7 1730 aa8.48□□□□□ -1.05
COX6A1-202ENST00000549525 ZBTB42B2RXF5 422 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 ERVV-2B6SEH9 535 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 APAF1O14727 1248 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 ICMTO60725 284 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 NEFLP07196 543 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 TMPOP42166 694 aaKnown RBP8.47□□□□□ -1.05
COX6A1-202ENST00000549525 MTHFSDQ2M296 383 aaKnown RBP8.47□□□□□ -1.05
COX6A1-202ENST00000549525 DHX32Q7L7V1 743 aaKnown RBP8.47□□□□□ -1.05
COX6A1-202ENST00000549525 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 HOMEZQ8IX15 550 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 EDEM1Q92611 657 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 CHMP4AQ9BY43 222 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 FAM13BQ9NYF5 915 aa8.47□□□□□ -1.05
COX6A1-202ENST00000549525 RGPD1P0DJD0 1748 aa8.46□□□□□ -1.05
COX6A1-202ENST00000549525 H3BRB1 525 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 FZD6O60353 706 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 MMP20O60882 483 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 FAM13AO94988 1023 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 BRD1O95696 1058 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 PDGFAP04085 211 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 PHKG2P15735 406 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 ALAS2P22557 587 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 DNM1Q05193 864 aaKnown RBP8.46□□□□□ -1.06
COX6A1-202ENST00000549525 TEFQ10587 303 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 PHACTR3Q96KR7 559 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 TUT1Q9H6E5 874 aaKnown RBP8.46□□□□□ -1.06
COX6A1-202ENST00000549525 BABAM1Q9NWV8 329 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 RGS17Q9UGC6 210 aaPredicted RBP8.46□□□□□ -1.06
COX6A1-202ENST00000549525 MAP3K5Q99683 1374 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 PARP4Q9UKK3 1724 aaKnown RBP8.46□□□□□ -1.06
COX6A1-202ENST00000549525 DISP2A7MBM2 1401 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 TNS2Q63HR2 1409 aa8.46□□□□□ -1.06
COX6A1-202ENST00000549525 ALBP02768 609 aa8.45□□□□□ -1.06
COX6A1-202ENST00000549525 C20orf204Q6ZNR8 217 aa8.45□□□□□ -1.06
COX6A1-202ENST00000549525 WDR63Q8IWG1 891 aa8.45□□□□□ -1.06
COX6A1-202ENST00000549525 TRPM4Q8TD43 1214 aa8.45□□□□□ -1.06
COX6A1-202ENST00000549525 SCARF2Q96GP6 870 aaPredicted RBP8.45□□□□□ -1.06
COX6A1-202ENST00000549525 TLR7Q9NYK1 1049 aaKnown RBP8.45□□□□□ -1.06
COX6A1-202ENST00000549525 MEGF6O75095 1541 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 A6NHS1 94 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 CYP27B1O15528 508 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 MZF1P28698 734 aaPredicted RBP8.44□□□□□ -1.06
COX6A1-202ENST00000549525 IRS1P35568 1242 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 CABP4P57796 275 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 HNRNPUQ00839 825 aaKnown RBP eCLIP8.44□□□□□ -1.06
COX6A1-202ENST00000549525 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
COX6A1-202ENST00000549525 KCNMA1Q12791 1236 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
COX6A1-202ENST00000549525 C8orf86Q6ZUL3 223 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 BEND7Q8N7W2 519 aaPredicted RBP8.44□□□□□ -1.06
COX6A1-202ENST00000549525 CCDC87Q9NVE4 849 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 POLIQ9UNA4 740 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 BCL9O00512 1426 aa8.44□□□□□ -1.06
COX6A1-202ENST00000549525 M0R082 166 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 RNMTO43148 476 aaKnown RBP8.43□□□□□ -1.06
COX6A1-202ENST00000549525 GNAI1P63096 354 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 GPLD1P80108 840 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 ARHGAP4P98171 946 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 TAF7Q15545 349 aaPredicted RBP8.43□□□□□ -1.06
COX6A1-202ENST00000549525 ALKBH2Q6NS38 261 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 MICALL1Q8N3F8 863 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 ZNF417Q8TAU3 575 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
COX6A1-202ENST00000549525 ZNF587Q96SQ5 575 aaPredicted RBP8.43□□□□□ -1.06
COX6A1-202ENST00000549525 TRAIPQ9BWF2 469 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 MYH16Q9H6N6 1097 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 TMEM63CQ9P1W3 806 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 MKL2Q9ULH7 1088 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 GNEQ9Y223 722 aaKnown RBP8.43□□□□□ -1.06
COX6A1-202ENST00000549525 IL16Q14005 1332 aa8.43□□□□□ -1.06
COX6A1-202ENST00000549525 HOXD8P13378 290 aaPredicted RBP8.42□□□□□ -1.06
COX6A1-202ENST00000549525 NRLP54845 237 aa8.42□□□□□ -1.06
COX6A1-202ENST00000549525 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
COX6A1-202ENST00000549525 PODNQ7Z5L7 613 aa8.42□□□□□ -1.06
COX6A1-202ENST00000549525 GLYCTKQ8IVS8 523 aa8.42□□□□□ -1.06
COX6A1-202ENST00000549525 MARCH10Q8NA82 808 aaPredicted RBP8.42□□□□□ -1.06
COX6A1-202ENST00000549525 SYTL4Q96C24 671 aaPredicted RBP8.42□□□□□ -1.06
COX6A1-202ENST00000549525 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
COX6A1-202ENST00000549525 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
COX6A1-202ENST00000549525 FNDC3AQ9Y2H6 1198 aaKnown RBP8.42□□□□□ -1.06
COX6A1-202ENST00000549525 GLI3P10071 1580 aa8.42□□□□□ -1.06
COX6A1-202ENST00000549525 RGPD2P0DJD1 1756 aa8.42□□□□□ -1.06
COX6A1-202ENST00000549525 ZBED9Q6R2W3 1325 aa8.41□□□□□ -1.06
COX6A1-202ENST00000549525 BTBD11A6QL63 1104 aa8.41□□□□□ -1.06
COX6A1-202ENST00000549525 E9PSI1 815 aa8.41□□□□□ -1.06
COX6A1-202ENST00000549525 RNF225M0QZC1 329 aaPredicted RBP8.41□□□□□ -1.06
COX6A1-202ENST00000549525 PLAURQ03405 335 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms