RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
TRAFD1-206ENST00000549358 CYP2B6P20813 491 aa13.49□□□□□ -0.25
TRAFD1-206ENST00000549358 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
TRAFD1-206ENST00000549358 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
TRAFD1-206ENST00000549358 GUCD1Q96NT3 240 aa13.49□□□□□ -0.25
TRAFD1-206ENST00000549358 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-206ENST00000549358 CACNA1FO60840 1977 aa13.49□□□□□ -0.25
TRAFD1-206ENST00000549358 SALL1Q9NSC2 1324 aa13.48□□□□□ -0.25
TRAFD1-206ENST00000549358 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-206ENST00000549358 DENND2AQ9ULE3 1009 aa13.48□□□□□ -0.25
TRAFD1-206ENST00000549358 DDX60LQ5H9U9 1706 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 FAM196BA6NMK8 535 aa13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 COL6A1P12109 1028 aa13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 RFX5P48382 616 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 HMGCS2P54868 508 aa13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 PABPC4Q13310 644 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 LRRC26Q2I0M4 334 aa13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 MAP3K21Q5TCX8 1036 aa13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 FAM109BQ6ICB4 259 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 ATG9AQ7Z3C6 839 aa13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 DZIP1Q86YF9 867 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 ZNF280CQ8ND82 737 aa13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 ASCC2Q9H1I8 757 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 VCANP13611 3396 aa13.47□□□□□ -0.25
TRAFD1-206ENST00000549358 GAKO14976 1311 aa13.46□□□□□ -0.25
TRAFD1-206ENST00000549358 TBC1D12O60347 775 aa13.46□□□□□ -0.25
TRAFD1-206ENST00000549358 PHKA1P46020 1223 aa13.46□□□□□ -0.25
TRAFD1-206ENST00000549358 ATP2B3Q16720 1220 aa13.46□□□□□ -0.25
TRAFD1-206ENST00000549358 USP44Q9H0E7 712 aa13.46□□□□□ -0.25
TRAFD1-206ENST00000549358 SIL1Q9H173 461 aa13.46□□□□□ -0.25
TRAFD1-206ENST00000549358 ABCF2Q9UG63 623 aa13.46□□□□□ -0.25
TRAFD1-206ENST00000549358 EYSQ5T1H1 3165 aa13.46□□□□□ -0.26
TRAFD1-206ENST00000549358 RFX7Q2KHR2 1363 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 SEMA3EO15041 775 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 PEX10O60683 326 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 XRCC5P13010 732 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 BTDP43251 543 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 CACNB2Q08289 660 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 SLF2Q8IX21 1173 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 ZGPATQ8N5A5 531 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 LBHD1Q9BQE6 289 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 NUDT12Q9BQG2 462 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 OSBPL5Q9H0X9 879 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 CEP126Q9P2H0 1117 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 MORF4L1Q9UBU8 362 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 DOCK2Q92608 1830 aa13.45□□□□□ -0.26
TRAFD1-206ENST00000549358 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
TRAFD1-206ENST00000549358 CCND3P30281 292 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-206ENST00000549358 LHX8Q68G74 356 aa13.44□□□□□ -0.26
TRAFD1-206ENST00000549358 GPRC5AQ8NFJ5 357 aa13.44□□□□□ -0.26
TRAFD1-206ENST00000549358 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-206ENST00000549358 P2RX7Q99572 595 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-206ENST00000549358 DOCK1Q14185 1865 aa13.44□□□□□ -0.26
TRAFD1-206ENST00000549358 CUL9Q8IWT3 2517 aa13.44□□□□□ -0.26
TRAFD1-206ENST00000549358 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 USP17L5A8MUK1 530 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 ZKSCAN1P17029 563 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 CAP2P40123 477 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 RRP1BQ14684 758 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 SH3D19Q5HYK7 790 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 ZNF697Q5TEC3 545 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 CCDC102BQ68D86 513 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 SOCS4Q8WXH5 440 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 TXNRD2Q9NNW7 524 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 PRDM6Q9NQX0 595 aa13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 SPTBN5Q9NRC6 3674 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-206ENST00000549358 MROH7-TTC4A0A0A0MT08 1334 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 GPR75-ASB3A0A0A6YYF3 556 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 CIAO1O76071 339 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 ADORA1P30542 326 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 RHBDL3P58872 404 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 MECOMQ03112 1051 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 PDE3AQ14432 1141 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 CCL14Q16627 93 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 SPTY2D1Q68D10 685 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 CCAR1Q8IX12 1150 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 TRMT44Q8IYL2 757 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 CDX2Q99626 313 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 AS3MTQ9HBK9 375 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 PTPRFP10586 1907 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
TRAFD1-206ENST00000549358 HAX1O00165 279 aa13.41□□□□□ -0.26
TRAFD1-206ENST00000549358 TIMM10P62072 90 aa13.41□□□□□ -0.26
TRAFD1-206ENST00000549358 MTMR2Q13614 643 aa13.41□□□□□ -0.26
TRAFD1-206ENST00000549358 Q3C1V9 767 aa13.41□□□□□ -0.26
TRAFD1-206ENST00000549358 TMOD4Q9NZQ9 345 aa13.41□□□□□ -0.26
TRAFD1-206ENST00000549358 RBPJLQ9UBG7 517 aa13.41□□□□□ -0.26
TRAFD1-206ENST00000549358 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
TRAFD1-206ENST00000549358 PTPRCP08575 1304 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 MAPK4P31152 587 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 HOXA7P31268 230 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 RGS2P41220 211 aa13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-206ENST00000549358 BACE1P56817 501 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms