RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 PHIPQ8WWQ0 1821 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 PHF20L1A8MW92 1017 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 PUM3Q15397 648 aaKnown RBP10.57□□□□□ -0.72
TROAP-208ENST00000548817 LRRC24Q50LG9 513 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 USP38Q8NB14 1042 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 ADAMTS19Q8TE59 1207 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 KAZALD1Q96I82 304 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 ASB2Q96Q27 587 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 UHRF1Q96T88 793 aaPredicted RBP10.57□□□□□ -0.72
TROAP-208ENST00000548817 THEGQ9P2T0 379 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 MORF4L1Q9UBU8 362 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 LOC285556D6RIA3 1793 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 SLC5A1P13866 664 aa10.56□□□□□ -0.72
TROAP-208ENST00000548817 ZKSCAN1P17029 563 aaPredicted RBP10.56□□□□□ -0.72
TROAP-208ENST00000548817 RABL6Q3YEC7 729 aaPredicted RBP10.56□□□□□ -0.72
TROAP-208ENST00000548817 C9orf50Q5SZB4 431 aa10.56□□□□□ -0.72
TROAP-208ENST00000548817 MRPL50Q8N5N7 158 aaKnown RBP10.56□□□□□ -0.72
TROAP-208ENST00000548817 WDR66Q8TBY9 1149 aa10.56□□□□□ -0.72
TROAP-208ENST00000548817 NUDT12Q9BQG2 462 aa10.56□□□□□ -0.72
TROAP-208ENST00000548817 GNL3LQ9NVN8 582 aaKnown RBP10.56□□□□□ -0.72
TROAP-208ENST00000548817 HDAC5Q9UQL6 1122 aa10.56□□□□□ -0.72
TROAP-208ENST00000548817 E9PSI1 815 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 MSCO60682 206 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 CTNND1O60716 968 aaKnown RBP10.55□□□□□ -0.72
TROAP-208ENST00000548817 CYP2B6P20813 491 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 MRPS5P82675 430 aaKnown RBP10.55□□□□□ -0.72
TROAP-208ENST00000548817 MAP3K10Q02779 954 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 CACNB2Q08289 660 aaPredicted RBP10.55□□□□□ -0.72
TROAP-208ENST00000548817 TCP10Q12799 353 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 AKNAD1Q5T1N1 836 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 ANKRD44Q8N8A2 993 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 LRRFIP2Q9Y608 721 aaKnown RBP10.55□□□□□ -0.72
TROAP-208ENST00000548817 MUC6Q6W4X9 2439 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 KIF16BQ96L93 1317 aa10.55□□□□□ -0.72
TROAP-208ENST00000548817 TRIM75PA6NK02 468 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 EYA2O00167 538 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 DNM1LO00429 736 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 RTP1P59025 263 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 PDE3AQ14432 1141 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 TREML2Q5T2D2 321 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 CDC42EP5Q6NZY7 148 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 KLHDC4Q8TBB5 520 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 LPIN2Q92539 896 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 SENP6Q9GZR1 1112 aaPredicted RBP10.54□□□□□ -0.72
TROAP-208ENST00000548817 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
TROAP-208ENST00000548817 ENTPD3O75355 529 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 NFIAQ12857 509 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 GRIN2CQ14957 1233 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 VGLL2Q8N8G2 317 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 SSH1Q8WYL5 1049 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 SNX27Q96L92 541 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 USP44Q9H0E7 712 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 CEP126Q9P2H0 1117 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 DAGLAQ9Y4D2 1042 aa10.53□□□□□ -0.72
TROAP-208ENST00000548817 RLFQ13129 1914 aa10.52□□□□□ -0.72
TROAP-208ENST00000548817 MYH13Q9UKX3 1938 aa10.52□□□□□ -0.72
TROAP-208ENST00000548817 LDHBP07195 334 aaKnown RBP10.52□□□□□ -0.73
TROAP-208ENST00000548817 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.73
TROAP-208ENST00000548817 FGFR2P21802 821 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 CCND3P30281 292 aaPredicted RBP10.52□□□□□ -0.73
TROAP-208ENST00000548817 MAPK4P31152 587 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 RGS2P41220 211 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 LPAR1Q92633 364 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 USP6NLQ92738 828 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 GAS2L1Q99501 681 aaPredicted RBP10.52□□□□□ -0.73
TROAP-208ENST00000548817 APBA2Q99767 749 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 IDI2Q9BXS1 227 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 ASCC2Q9H1I8 757 aaPredicted RBP10.52□□□□□ -0.73
TROAP-208ENST00000548817 SMC4Q9NTJ3 1288 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
TROAP-208ENST00000548817 DNAJB2P25686 324 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 ATN1P54259 1190 aaPredicted RBP10.51□□□□□ -0.73
TROAP-208ENST00000548817 SNX17Q15036 470 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 ATP2B3Q16720 1220 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 ALDH1L2Q3SY69 923 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 ZGPATQ8N5A5 531 aaKnown RBP10.51□□□□□ -0.73
TROAP-208ENST00000548817 BADQ92934 168 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 RNPC3Q96LT9 517 aaKnown RBP10.51□□□□□ -0.73
TROAP-208ENST00000548817 SIL1Q9H173 461 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 ZNF576Q9H609 170 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 USP40Q9NVE5 1235 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 DDX20Q9UHI6 824 aaKnown RBP10.51□□□□□ -0.73
TROAP-208ENST00000548817 DENND2AQ9ULE3 1009 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 ATP11BQ9Y2G3 1177 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 RFX7Q2KHR2 1363 aa10.51□□□□□ -0.73
TROAP-208ENST00000548817 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.5□□□□□ -0.73
TROAP-208ENST00000548817 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.5□□□□□ -0.73
TROAP-208ENST00000548817 SEMA3EO15041 775 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 SH3D19Q5HYK7 790 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 C1orf53Q5VUE5 145 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 MFSD14CQ5VZR4 134 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 ARRDC4Q8NCT1 418 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 ZNF280CQ8ND82 737 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 GPRC5AQ8NFJ5 357 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
TROAP-208ENST00000548817 LRFN3Q9BTN0 628 aa10.5□□□□□ -0.73
TROAP-208ENST00000548817 PDLIM7Q9NR12 457 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms