RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 TAOK2Q9UL54 1235 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 CCDC171Q6TFL3 1326 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 MYH4Q9Y623 1939 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 PATL2C9JE40 543 aaKnown RBP13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 UBE2Q2LH0YL09 131 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 POLR3DP05423 398 aaPredicted RBP13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 HTRA3P83110 453 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 RGMBQ6NW40 437 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 CRACR2BQ8N4Y2 399 aaPredicted RBP13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 RUFY2Q8WXA3 655 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 WRNIP1Q96S55 665 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 ZNF112Q9UJU3 913 aa13.62□□□□□ -0.23
CALCOCO1-208ENST00000547988 APPP05067 770 aa13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 CHMLP26374 656 aa13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 ECE1P42892 770 aa13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 TDO2P48775 406 aa13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 SBK1Q52WX2 424 aa13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 ZNF589Q86UQ0 364 aaPredicted RBP13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 IFNL3Q8IZI9 196 aa13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 CSADQ9Y600 493 aa13.61□□□□□ -0.23
CALCOCO1-208ENST00000547988 ROBO3Q96MS0 1386 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 PHF20L1A8MW92 1017 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 USP17L12C9JPN9 530 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 USP17L21D6R901 530 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 PLCD1P51178 756 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 ZNF157P51786 506 aaPredicted RBP13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 VGLL4Q14135 290 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 NOL9Q5SY16 702 aaKnown RBP13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 C12orf60Q5U649 245 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 CTR9Q6PD62 1173 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 CCDC102AQ96A19 550 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 NAPBQ9H115 298 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 ZMYM6O95789 1325 aa13.6□□□□□ -0.23
CALCOCO1-208ENST00000547988 LOC285556D6RIA3 1793 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 FOXP2O15409 715 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 CTNND1O60716 968 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 SLC10A3P09131 477 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 HSPD1P10809 573 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 INPP5BP32019 993 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 GABPAQ06546 454 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 ALX1Q15699 326 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 PAXIP1Q6ZW49 1069 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 SLC10A4Q96EP9 437 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 CLMNQ96JQ2 1002 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 CEP350Q5VT06 3117 aa13.59□□□□□ -0.23
CALCOCO1-208ENST00000547988 SLURP2P0DP57 97 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 CYP2D6P10635 497 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 VPS53Q5VIR6 699 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 CYP4F22Q6NT55 531 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 CASC1Q6TDU7 716 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 RASAL3Q86YV0 1011 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 SCYL3Q8IZE3 742 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 CAPNS2Q96L46 248 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 GINM1Q9NU53 330 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 SNCAIPQ9Y6H5 919 aa13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 WDR33Q9C0J8 1336 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-208ENST00000547988 MINDY4BA8MYZ0 360 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 FAM155AB1AL88 458 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 SGSM2O43147 1006 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 CDC45O75419 566 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 ZBTB48P10074 688 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 CAP2P40123 477 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 VEGFBP49765 207 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 NOGQ13253 232 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 C16orf86Q6ZW13 317 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 ERO1BQ86YB8 467 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 DNAJC5GQ8N7S2 189 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 IL25Q9H293 177 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
CALCOCO1-208ENST00000547988 CYP2D7A0A087X1C5 515 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 FGAP02671 866 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 SLC3A2P08195 630 aaKnown RBP13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 ASNSP08243 561 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 SHMT1P34896 483 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 EVX2Q03828 476 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 WNK4Q96J92 1243 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 PICK1Q9NRD5 415 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
CALCOCO1-208ENST00000547988 MAP2K2P36507 400 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 CDK8P49336 464 aa13.55□□□□□ -0.24
CALCOCO1-208ENST00000547988 PPATQ06203 517 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms